CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plasma membrane 1
plastid 4
cytosol 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	41.84	87.13
EES18230	Sorghum	cytosol	84.15	86.62
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	42.95	86.31
Os05t0410500-01	Rice	cytosol, plasma membrane	71.79	78.24
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	74.01	77.45
TraesCS1D01G256700.1	Wheat	plasma membrane	74.17	76.97
TraesCS1B01G267900.1	Wheat	plasma membrane	73.53	76.44
TraesCS1A01G257400.1	Wheat	plasma membrane	73.85	76.39
EES19523	Sorghum	plasma membrane	72.42	75.29
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	68.15	71.79
OQU78006	Sorghum	cytosol	61.65	64.73
GSMUA_Achr8P21720_001	Banana	nucleus	60.06	61.53
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	54.83	57.76
VIT_08s0040g00830.t01	Wine grape	peroxisome	53.09	55.93
KRH66698	Soybean	plasma membrane	46.43	54.77
KRG95048	Soybean	cytosol, nucleus, plasma membrane	50.71	52.46
PGSC0003DMT400065326	Potato	plasma membrane	50.71	52.37
KRH66693	Soybean	mitochondrion	50.4	52.13
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.99	52.06
EER88193	Sorghum	cytosol, golgi, peroxisome	48.02	50.92
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	49.13	50.41
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	33.44	35.58
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	33.44	35.34
EES03649	Sorghum	cytosol, peroxisome, plasma membrane	31.7	34.72
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	32.49	34.51
KXG37624	Sorghum	plasma membrane	32.65	34.05
EER98133	Sorghum	plasma membrane	35.02	33.95
EES13016	Sorghum	cytosol, nucleus, plasma membrane	33.76	33.33
EES03650	Sorghum	plasma membrane	30.59	33.16
KXG21716	Sorghum	cytosol, peroxisome, plasma membrane	30.43	33.16
OQU83363	Sorghum	plasma membrane	27.58	30.37
OQU80662	Sorghum	plasma membrane	24.09	29.01

Protein Annotations

MapMan:24.2.2.9	EntrezGene:8076953	UniProt:C5YXT8	EnsemblPlants:EES18229	ProteinID:EES18229	ProteinID:EES18229.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	EnsemblPlantsGene:SORBI_3009G136500	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0001A8870A	RefSeq:XP_002439799.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:49263612..49267981

Molecular Weight (calculated)

68608.1 Da

IEP (calculated)

7.129

GRAVY (calculated)

0.241

Length

631 amino acids

Sequence
(BLAST)

001: MPCSACEHHT HQSLAITSSE SSLHPAMATT TAVGRNGEGE QKRREKGGFK TMPFILGNDI CDRFATAGFG ANLITYLTKQ LHLPLVEASN LLTNFGGTSS
101: LTTILGALAA DSFAGRFWTI VAGSVFYQLG MLGLVVSALL PWLRPSPCSA PPGGPECHRA SGLQLAVLYL SLLCTAFGSG GLRPCVVMFG TDQFDHETSE
201: KQVTAEAAEA VAERKRRYFN LYFFTMGVAA LLALTVVVYI QDNVGWGWGF GIPAIAMFVS IVVFVIGYPL YVQVKPGGSP FTRLAQVAAA AFKKRNAAVP
301: EDTGMLYQDK ELDVLISTNG RLLHTNQLTF LDRAAIVTPG DISASGQPDL WRLSTVHRVE ELKSIVRMLP IWSAGIMLST IESHNGTFII VQAGSMDRHI
401: TRHFEIPPAT MSIFGTAVFL VSLALYDRAF VPLARRVTGL QSGITYFQRM GVGLAIHILG VATAALVETK RRHAAADHGL LDNPTAVIPL SVFWLVPQFA
501: VHGVAGAFSS VGHMEFLYDQ APESMRSTAA ALFWLAGAFG NYLGTVLVTV VQRTTRARGN DWLQDNINRG RIDNYYWLVT CLMVLNLGYF LICFRFYTMK
601: PLEMADEQDD HDGECELSTL QKNDTGAGGV V

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.