Factsheet for PGSC0003DMT400065326

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
plasma membrane 3
vacuole 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	48.94	94.92
VIT_08s0040g00830.t01	Wine grape	peroxisome	66.78	68.11
KRH66698	Soybean	plasma membrane	56.63	64.67
KRG95048	Soybean	cytosol, nucleus, plasma membrane	63.67	63.77
KRH66693	Soybean	mitochondrion	63.34	63.44
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	59.41	59.02
GSMUA_Achr8P21720_001	Banana	nucleus	56.63	56.17
Os05t0410500-01	Rice	cytosol, plasma membrane	50.9	53.71
PGSC0003DMT400037693	Potato	plasma membrane	50.74	53.45
TraesCS1B01G267900.1	Wheat	plasma membrane	52.86	53.21
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.33	53.18
TraesCS1D01G256700.1	Wheat	plasma membrane	52.86	53.12
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	52.37	53.07
Zm00001d038181_P001	Maize	plasma membrane	52.05	52.82
TraesCS1A01G257400.1	Wheat	plasma membrane	52.7	52.79
TraesCS1D01G257200.1	Wheat	cytosol, nucleus, plasma membrane	50.9	52.36
HORVU1Hr1G063460.2	Barley	plasma membrane	50.57	52.28
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	50.74	52.19
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	50.74	52.19
Os05t0410900-02	Rice	plasma membrane	50.74	51.84
Zm00001d038185_P001	Maize	plasma membrane	44.35	51.62
OQU78006	Sorghum	cytosol	50.74	51.58
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	25.53	51.49
EES19523	Sorghum	plasma membrane	51.06	51.4
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	50.25	51.25
EES18230	Sorghum	cytosol	51.39	51.22
EES18229	Sorghum	plastid	52.37	50.71
Os05t0411100-00	Rice	cytosol, nucleus, plasma membrane	51.23	50.65
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	49.26	50.42
HORVU1Hr1G063470.10	Barley	peroxisome	49.59	50.42
TraesCS1D01G257100.1	Wheat	plasma membrane	49.59	50.25
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	49.59	50.08
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	48.45	49.42
TraesCS1B01G268200.1	Wheat	plasma membrane	49.75	47.87
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	17.02	46.85
PGSC0003DMT400019427	Potato	endoplasmic reticulum, plasma membrane	12.28	35.89
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	35.52	35.81
PGSC0003DMT400065197	Potato	mitochondrion	33.22	34.7
PGSC0003DMT400065196	Potato	plasma membrane	33.55	34.69
PGSC0003DMT400056834	Potato	endoplasmic reticulum, plasma membrane	11.78	34.62
PGSC0003DMT400069660	Potato	plasma membrane	32.41	34.26
PGSC0003DMT400019420	Potato	plasma membrane	30.28	33.88
PGSC0003DMT400040284	Potato	plasma membrane	32.24	33.68
PGSC0003DMT400040231	Potato	plasma membrane	32.24	33.62
PGSC0003DMT400016889	Potato	plasma membrane	30.28	33.51
PGSC0003DMT400019426	Potato	plasma membrane	30.28	33.45
PGSC0003DMT400004850	Potato	plasma membrane	31.1	33.16
PGSC0003DMT400010578	Potato	plasma membrane	23.73	33.1
PGSC0003DMT400065303	Potato	plasma membrane	28.48	33.08
PGSC0003DMT400019419	Potato	plasma membrane	27.33	33.0
PGSC0003DMT400040285	Potato	plasma membrane	31.59	32.99
PGSC0003DMT400040282	Potato	plasma membrane	31.26	32.99
PGSC0003DMT400068025	Potato	plasma membrane	31.91	32.55
PGSC0003DMT400000812	Potato	plasma membrane, plastid	29.79	32.16
PGSC0003DMT400019424	Potato	mitochondrion	17.68	32.14
PGSC0003DMT400074797	Potato	plasma membrane	27.82	32.08
PGSC0003DMT400006545	Potato	plasma membrane	24.06	31.48
PGSC0003DMT400065310	Potato	plasma membrane	28.15	30.99
PGSC0003DMT400075590	Potato	plasma membrane	29.13	30.9
PGSC0003DMT400040275	Potato	plasma membrane	30.11	30.87
PGSC0003DMT400010582	Potato	plasma membrane	27.82	30.8
PGSC0003DMT400065200	Potato	cytosol, peroxisome, plasma membrane	29.62	30.42
PGSC0003DMT400040277	Potato	cytosol, nucleus, plasma membrane	17.51	26.82
PGSC0003DMT400016891	Potato	plasma membrane	17.35	22.22

Protein Annotations

MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M1CDS5
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	EnsemblPlantsGene:PGSC0003DMG400025395	PGSC:PGSC0003DMG400025395	EnsemblPlants:PGSC0003DMT400065326
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00029672B6
SEG:seg	:	:	:	:	:

Description

Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400025395]

Coordinates

chr6:-:8311895..8316339

Molecular Weight (calculated)

68305.1 Da

IEP (calculated)

8.166

GRAVY (calculated)

0.119

Length

611 amino acids

Sequence
(BLAST)

001: MKVAKQELVV QENGKKEEDE TIETEKRKLG GMKTMPFILA NEVCDRFVGA GFHSNLITYL TQVLNVPLIK ASNTLANFSG VSNFTPLIGA LVADSFAGRF
101: WTIIVASIIY EMGLISITIS AIMPQLRPPP CPTQENCKEA SNSQLWALYI CLLLTSIGTG GLRPCVVTFA ADQLDMRKSK VESRKWNFYN LFYFCVTMAT
201: LTALTVVVYI QDNVNWGWGL GLLTIAMALS VVVFVVGSPF YRKVEPGGSP LIRLTQVIVA SVRKRKVVVP DDDRLLYENR ELDSAISHDG RLLHTNQFKW
301: IDRSAVVTGD DMKESCQPNL WRLATVHRTE ELKCILRMLP IWAAGILHFA SHSHVGSFTI QQARSMDRHL SHSFQIPPAS MSIFSVLTVL IGLVLYERFF
401: VPFARRFTGH KSGITCLQRM GIGFAINILA TATSALAEIK RKTAAADHNL LDQPTTHVIP ISVFWLVPQY CLHGVAEVFM SVGHLEFLIE QFPESMRSTG
501: AALNSLASSF GNYLGTFIVT LVHRYTGKER NWLPDRNLNR GRLENFYWLM AGVQVVNFVY YLICASLYTY KPLEEITEGC KGTDVELADE TTLLDNSKGD
601: GQTDRARNGM N

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.