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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G257100.1 Wheat plasma membrane 96.53 96.85
HORVU1Hr1G063460.2 Barley plasma membrane 92.56 94.75
TraesCS1B01G268200.1 Wheat plasma membrane 96.53 91.97
OQU78006 Sorghum cytosol 80.5 81.03
Zm00001d038185_P001 Maize plasma membrane 70.25 80.95
Os05t0410800-01 Rice cytosol, extracellular, mitochondrion 28.26 77.03
TraesCS1A01G257400.1 Wheat plasma membrane 68.26 67.7
GSMUA_Achr8P21720_001 Banana nucleus 60.33 59.25
TraesCS1A01G257900.1 Wheat cytosol, nucleus, plasma membrane 57.36 58.42
KRH66698 Soybean plasma membrane 48.43 54.77
VIT_08s0040g00830.t01 Wine grape peroxisome 54.05 54.59
KRH66693 Soybean mitochondrion 53.06 52.62
KRG95048 Soybean cytosol, nucleus, plasma membrane 53.06 52.62
KRH66697 Soybean cytosol, peroxisome, plasma membrane 51.57 50.73
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 51.74 50.65
PGSC0003DMT400065326 Potato plasma membrane 50.08 49.59
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 24.79 47.62
TraesCS3A01G304500.1 Wheat cytosol, peroxisome, plasma membrane 35.04 36.36
TraesCS4A01G283900.1 Wheat golgi, unclear 35.37 35.85
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 35.21 34.8
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 35.04 34.42
TraesCS2A01G045500.1 Wheat plasma membrane 33.55 33.89
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 31.74 33.74
TraesCS3A01G304400.1 Wheat plasma membrane 32.73 33.67
TraesCS3A01G418700.1 Wheat plasma membrane 33.55 33.44
TraesCS3A01G418800.1 Wheat plasma membrane 33.88 32.96
TraesCS5A01G153200.1 Wheat plasma membrane 31.07 32.19
TraesCS7A01G054100.1 Wheat plasma membrane 29.59 31.91
TraesCS4A01G440500.1 Wheat plasma membrane 28.93 31.76
TraesCS4A01G440300.1 Wheat plasma membrane 28.93 31.76
TraesCS4A01G440600.1 Wheat plasma membrane 28.76 31.58
TraesCS4A01G440400.1 Wheat plasma membrane 28.76 31.58
TraesCS7A01G054000.2 Wheat plasma membrane 28.59 31.4
TraesCS4A01G440700.1 Wheat plasma membrane 28.93 31.31
TraesCS7A01G121600.1 Wheat plastid 26.45 28.93
Protein Annotations
EnsemblPlants:TraesCS1A01G257800.1EnsemblPlantsGene:TraesCS1A01G257800GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF168PFAM:PF00854SEG:seg
SUPFAM:SSF103473TIGR:cd06174TMHMM:TMhelixMapMan:24.2.2.9::
Description
No Description!
Coordinates
chr1A:+:449811986..449813992
Molecular Weight (calculated)
65447.1 Da
IEP (calculated)
8.103
GRAVY (calculated)
0.246
Length
605 amino acids
Sequence
(BLAST)
001: MADAAPADED GSPKKTKQGG FKTMPFILAN EVCDRFATAG FNANMITYLT QQLHLPLVEA SNLLTNFMGT AAFTPVFGAI IADSYAGRFW TIAAGGALYQ
101: LGMLGLVVSA LATALRPAPC AAAALSTPAC QRANGGQLAV LYVSLLFTAL GSGGIRPCVV AFGADQFGVG GRRPGGEQKW SFFNFYFFTM GLAVLLALTV
201: VVYVQENVGW GWGFGIPAIA MFVSVLSFVV GYPLYVRVKP GGSPFVRLVQ VVAAAIKKRK EAVPEDAGML YQNKELDAPI TADGRLLHTN QLRFLDRAAI
301: VTTTDADAVD SGAEPDMWRL ATVHRVEELK SIVRMLPLWA ASITLIAAAS HNFTFAIQQS RTMDRRLTPR FEIPPASMII FTTLTMLVSL SIYDRAFVPL
401: ARRYTGRQSG ISYFQRMGAG LAVSVLGVLA GALVEGKRRR AAAEHGLLDS PGATVPISVF WLVPQYALHG VSDALSTVAH MEFLYDQSPE SMRSSSAALF
501: WVAGSLGNYL GTLLVTVVQS ASGGEWLQDN INRGRLDYYY WLVTFLMALN LAYYIVCFHF YTLKSLDVEG NAAQRRQDDG EGQSRSAERE TELDAGRIGA
601: SKSCE
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.