Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038185_P001 | Maize | plasma membrane | 79.73 | 33.71 |
| Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 46.4 | 32.7 |
| Os05t0338900-00 | Rice | plasma membrane | 29.73 | 32.2 |
| HORVU1Hr1G063460.2 | Barley | plasma membrane | 77.93 | 29.27 |
| OQU78006 | Sorghum | cytosol | 77.93 | 28.79 |
| TraesCS1A01G257800.1 | Wheat | cytosol, peroxisome, plasma membrane | 77.03 | 28.26 |
| TraesCS1D01G257100.1 | Wheat | plasma membrane | 76.13 | 28.03 |
| TraesCS1B01G268200.1 | Wheat | plasma membrane | 77.93 | 27.24 |
| Os05t0410500-01 | Rice | cytosol, plasma membrane | 63.96 | 24.52 |
| Os01t0960900-00 | Rice | cytosol | 27.93 | 22.38 |
| GSMUA_Achr8P21720_001 | Banana | nucleus | 59.91 | 21.59 |
| KRH66698 | Soybean | plasma membrane | 46.85 | 19.44 |
| VIT_08s0040g00830.t01 | Wine grape | peroxisome | 52.25 | 19.37 |
| Os05t0410900-02 | Rice | plasma membrane | 50.45 | 18.73 |
| Os05t0411100-00 | Rice | cytosol, nucleus, plasma membrane | 49.55 | 17.8 |
| Os06t0264500-01 | Rice | extracellular | 47.3 | 17.59 |
| PGSC0003DMT400065326 | Potato | plasma membrane | 46.85 | 17.02 |
| KRH66693 | Soybean | mitochondrion | 45.95 | 16.72 |
| KRH66697 | Soybean | cytosol, peroxisome, plasma membrane | 44.14 | 15.94 |
| KRG95048 | Soybean | cytosol, nucleus, plasma membrane | 43.69 | 15.9 |
| Os01t0761400-01 | Rice | plasma membrane | 33.78 | 13.07 |
| Os07t0190650-00 | Rice | cytosol, peroxisome, plasma membrane | 35.14 | 12.62 |
| Os01t0761500-01 | Rice | plasma membrane | 33.33 | 12.54 |
| Os01t0913300-01 | Rice | plasma membrane | 33.78 | 12.5 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 31.08 | 11.73 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 30.63 | 11.58 |
| Os03t0687000-02 | Rice | plasma membrane | 30.63 | 11.58 |
| Os04t0660900-01 | Rice | plasma membrane, plastid | 31.53 | 11.09 |
| Os07t0190600-01 | Rice | cytosol, plastid | 0.0 | 0.0 |
| Os01t0960800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | ProteinID:BAF17448.2 | ProteinID:BAS93997.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:MFS_trans_sf | EnsemblPlantsGene:Os05g0410800 | EnsemblPlants:Os05t0410800-01 | PFAM:PF00854 | InterPro:POT_fam |
| PANTHER:PTHR11654 | PANTHER:PTHR11654:SF168 | UniProt:Q0DI75 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0001B67285 |
| SEG:seg | : | : | : | : | : |
Description
TGF-beta receptor, type I/II extracellular region family protein. (Os05t0410800-01)
Coordinates
chr5:+:20086443..20087179
Molecular Weight (calculated)
24114.0 Da
IEP (calculated)
6.942
GRAVY (calculated)
0.321
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: TTLTMLVSLA LYDRVLVPVA RRYTGRRSGI TYFQRMGAGF AVAALGVLAG ALVEAKRRAA AAEHGLLDAP GAVVPVSVFW LVPQYALHGV GDALATVGHM
101: EFLYDQSPES MRSSAAALFW VAGSLGNYLG TVLVTVVQSA SRGEWLQDNI NRGRLDYYYW LVTFLLVLNL AYYFVCFHFY TLKSFEVDAG DEAQRRRDVA
201: GSAEGETELS AGCVVASRNG VL
101: EFLYDQSPES MRSSAAALFW VAGSLGNYLG TVLVTVVQSA SRGEWLQDNI NRGRLDYYYW LVTFLLVLNL AYYFVCFHFY TLKSFEVDAG DEAQRRRDVA
201: GSAEGETELS AGCVVASRNG VL
001: MSISGAVDEA GTPLLAVTVD YRNKPAVKSS SGGWRSAGFI IGVEVAERFA YYGISSNLIT YLTGPLGQST AAAAANVNAW SGTASLLPLL GAFVADSFLG
101: RFRTILAASA LYIVGLGVLT LSAMIPSDCK VSNLLSSCSP RFQVITFFSA LYLVALAQGG HKPCVQAFGA DQFDEKEPEE CKAKSSFFNW WYFGMCFGTL
201: TTLWVLNYIQ DNLSWALGFG IPCIAMVVAL VVLLLGTCTY RFSIRREDQS PFVRIGNVYV AAVKNWSVSA LDVAAAEERL GLVSCSSSQQ FSFLNKALVA
301: KNGSCSIDEL EEAKSVLRLA PIWLTCLVYA VVFAQSPTFF TKQGATMERS ITPGYKISPA TLQSFISLSI VIFIPIYDRV LIPIARSFTH KPGGITMLQR
401: IGTGIFLSFL AMVVAALVEM KRLKTAADYG LVDSPDATVP MSVWWLVPQY VLFGITDVFA MVGLQEFFYD QVPNELRSVG LALYLSIFGI GNFLSSFMIS
501: IIEKATSQSG QASWFANNLN QAHLDYFYWL LACLSFIGLA SYLYVAKSYV SKRLDTS
101: RFRTILAASA LYIVGLGVLT LSAMIPSDCK VSNLLSSCSP RFQVITFFSA LYLVALAQGG HKPCVQAFGA DQFDEKEPEE CKAKSSFFNW WYFGMCFGTL
201: TTLWVLNYIQ DNLSWALGFG IPCIAMVVAL VVLLLGTCTY RFSIRREDQS PFVRIGNVYV AAVKNWSVSA LDVAAAEERL GLVSCSSSQQ FSFLNKALVA
301: KNGSCSIDEL EEAKSVLRLA PIWLTCLVYA VVFAQSPTFF TKQGATMERS ITPGYKISPA TLQSFISLSI VIFIPIYDRV LIPIARSFTH KPGGITMLQR
401: IGTGIFLSFL AMVVAALVEM KRLKTAADYG LVDSPDATVP MSVWWLVPQY VLFGITDVFA MVGLQEFFYD QVPNELRSVG LALYLSIFGI GNFLSSFMIS
501: IIEKATSQSG QASWFANNLN QAHLDYFYWL LACLSFIGLA SYLYVAKSYV SKRLDTS
Arabidopsis Description
NPF5.10Protein NRT1/ PTR FAMILY 5.10 [Source:UniProtKB/Swiss-Prot;Acc:Q0WP01]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.