Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 2
- extracellular 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0960800-01 | Rice | mitochondrion | 1.1 | 5.31 |
| Os07t0190650-00 | Rice | cytosol, peroxisome, plasma membrane | 1.29 | 1.13 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 0.74 | 0.68 |
| Os04t0660900-01 | Rice | plasma membrane, plastid | 0.55 | 0.48 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 0.18 | 0.17 |
| Os06t0264500-01 | Rice | extracellular | 0.18 | 0.17 |
| Os01t0913300-01 | Rice | plasma membrane | 0.18 | 0.17 |
| Os05t0411100-00 | Rice | cytosol, nucleus, plasma membrane | 0.18 | 0.16 |
| Os01t0761400-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0761500-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0960900-00 | Rice | cytosol | 0.0 | 0.0 |
| Os03t0687000-02 | Rice | plasma membrane | 0.0 | 0.0 |
| Os05t0338900-00 | Rice | plasma membrane | 0.0 | 0.0 |
| Os05t0410500-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Os05t0410800-01 | Rice | cytosol, extracellular, mitochondrion | 0.0 | 0.0 |
| Os05t0410900-02 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.50.140 | MapMan:35.1 | EntrezGene:4342616 | ProteinID:BAC83855.1 | ProteinID:BAF21002.1 | ProteinID:BAT00416.1 |
| InterPro:DUF223 | GO:GO:0000166 | GO:GO:0000723 | GO:GO:0003674 | GO:GO:0003678 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 |
| GO:GO:0006310 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0032508 | InterPro:NA-bd_OB-fold | EnsemblPlantsGene:Os07g0190600 | EnsemblPlants:Os07t0190600-01 |
| PFAM:PF02721 | PFAM:PF08646 | PFAM:PF16900 | PANTHER:PTHR23273 | UniProt:Q6Z4I5 | InterPro:REPA_OB_2 |
| InterPro:Rep_factor-A_C | SUPFAM:SSF50249 | UniParc:UPI00001BF497 | RefSeq:XP_015646347.1 | SEG:seg | : |
Description
Domain of unknown function DUF223 domain containing protein. (Os07t0190600-01)
Coordinates
chr7:-:4868011..4877912
Molecular Weight (calculated)
60099.4 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.283
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYSLLSQIN STRHNWRIKV RVARSWHLSG TSKRRDFTAL ELILVDEEGV GITACVGENE IQKFSTSIVE GHAYFLRNFR VSRQTKKLNA VPSTYAIFFT
101: PWTIVEEIPT EISGSLPLYI FNFVDFEDLD ERARHPNGLV DVIGQLTVVH PLVQSNGLNG PSVRRNVELR DLSDRLLEIT LWAEHATSFE DEFLIETIGK
201: DEPVIIVFAG LNMKLFSGAP SCRSSAATKW YINIDIPEIN AFRTSLQGRG CEVLLVPSDG AALGAANEAD ANRKSISELL SLNPHDNNDV RFTCDARIKE
301: IDVSSGWWYK ACSICRKGVK PTLQGFECVN CDNTEPIITP SYKLNVVIED NTDRAKIFMF GGMAEQVVRR TAADLVEESS ANQLLLPSPL RALIGRRFVF
401: QIVISEQTFR TGQLCFQVRK VFNPPPIDGQ NNGVHATLGN SLSHATLART SGAQKKCDPT PLMEASGSSS NKASTLQTYG VTELPTDPKG SATPPPPFAH
501: GAITKTSPQK GNEISEEHGT PVGKRSRSTR KELFSTKKVK ASDD
101: PWTIVEEIPT EISGSLPLYI FNFVDFEDLD ERARHPNGLV DVIGQLTVVH PLVQSNGLNG PSVRRNVELR DLSDRLLEIT LWAEHATSFE DEFLIETIGK
201: DEPVIIVFAG LNMKLFSGAP SCRSSAATKW YINIDIPEIN AFRTSLQGRG CEVLLVPSDG AALGAANEAD ANRKSISELL SLNPHDNNDV RFTCDARIKE
301: IDVSSGWWYK ACSICRKGVK PTLQGFECVN CDNTEPIITP SYKLNVVIED NTDRAKIFMF GGMAEQVVRR TAADLVEESS ANQLLLPSPL RALIGRRFVF
401: QIVISEQTFR TGQLCFQVRK VFNPPPIDGQ NNGVHATLGN SLSHATLART SGAQKKCDPT PLMEASGSSS NKASTLQTYG VTELPTDPKG SATPPPPFAH
501: GAITKTSPQK GNEISEEHGT PVGKRSRSTR KELFSTKKVK ASDD
001: MPLEITPVSQ LHSHLSTCKV KVRIARLWAY HKKDRPKDIM GIDLLLVDDK GERIQASIRS QLLSKFQEKL EEGDCYMIMN FEISDNGGSY RASSHPYKIN
101: FMSMTHIIGM QELKEVNVSG RQTKLLNLQL RDLGESVIDV TLWEKWAEDL YSYVKGYKDG SIVLVGSLMK IKTYFKNVYL TFTIRDSLIW FLIFSRQDLC
201: PKSSFSTKLF INSSIAEITE FKESLAKSDC LALTTISTIT SSSSSKHSKP SFSLRDQKTI ADINSGGACN IIASIFSIDT KVPWFYIGCN ICFKKVSPYF
301: NPETEEIEAG KYECEKCDTF VTTTSTRFRV QVTVLDHTGE ASFLLFDQDV IKLIHKSAYE LLEQQVQFNR SDKIPQELLD LEGRQFVFTI QGSDSTKFSR
401: PSIFRVYELT DKPEIVQKFQ ENLLQMNTTD PNTHMVSSFS NSTTSETEPD SDMNIVSTPS NATTNQIDTE SSEAANYENS NSSIKTSKNT SKITKLTPTS
501: KRALTSSKDN AAQKSSTKPK LLSKAEIKKE KK
101: FMSMTHIIGM QELKEVNVSG RQTKLLNLQL RDLGESVIDV TLWEKWAEDL YSYVKGYKDG SIVLVGSLMK IKTYFKNVYL TFTIRDSLIW FLIFSRQDLC
201: PKSSFSTKLF INSSIAEITE FKESLAKSDC LALTTISTIT SSSSSKHSKP SFSLRDQKTI ADINSGGACN IIASIFSIDT KVPWFYIGCN ICFKKVSPYF
301: NPETEEIEAG KYECEKCDTF VTTTSTRFRV QVTVLDHTGE ASFLLFDQDV IKLIHKSAYE LLEQQVQFNR SDKIPQELLD LEGRQFVFTI QGSDSTKFSR
401: PSIFRVYELT DKPEIVQKFQ ENLLQMNTTD PNTHMVSSFS NSTTSETEPD SDMNIVSTPS NATTNQIDTE SSEAANYENS NSSIKTSKNT SKITKLTPTS
501: KRALTSSKDN AAQKSSTKPK LLSKAEIKKE KK
Arabidopsis Description
Nucleic acid-binding, OB-fold-like protein [Source:UniProtKB/TrEMBL;Acc:F4IHC4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.