Factsheet for Os12t0638300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
peroxisome 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

extracellular: 18372294
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	70.87	70.75
Zm00001d031213_P001	Maize	plasma membrane	58.77	67.78
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	68.99	66.28
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	68.48	66.23
HORVU5Hr1G000800.3	Barley	cytosol, peroxisome, plasma membrane	68.14	66.23
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	68.99	66.18
TraesCS2A01G045500.1	Wheat	plasma membrane	66.78	65.44
TraesCS2B01G057700.1	Wheat	plasma membrane	66.61	65.28
TraesCS2D01G044200.1	Wheat	plasma membrane	66.27	64.94
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	67.12	64.17
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	67.12	63.96
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	64.91	63.82
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	64.05	63.3
TraesCS2D01G044000.1	Wheat	plasma membrane	64.4	62.79
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	64.57	62.64
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	65.59	62.3
HORVU7Hr1G018540.1	Barley	cytosol, nucleus, plasma membrane	64.74	61.89
GSMUA_Achr5P15030_001	Banana	cytosol	46.0	56.96
Os03t0687000-02	Rice	plasma membrane	56.56	56.56
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	53.49	56.07
HORVU2Hr1G006820.2	Barley	golgi, plasma membrane	64.57	55.25
VIT_14s0066g02590.t01	Wine grape	plasma membrane	53.49	53.68
PGSC0003DMT400065197	Potato	mitochondrion	52.98	53.16
Solyc03g113430.2.1	Tomato	plasma membrane	52.81	52.99
Os07t0190650-00	Rice	cytosol, peroxisome, plasma membrane	55.37	52.59
Bra035886.1-P	Field mustard	plasma membrane	42.76	50.5
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	51.28	50.42
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	50.77	50.34
CDY45756	Canola	plasma membrane	48.72	50.09
Solyc03g113420.2.1	Tomato	plasma membrane	50.09	50.09
PGSC0003DMT400065196	Potato	plasma membrane	50.43	50.08
CDY09846	Canola	plasma membrane	36.46	49.88
KRH56968	Soybean	plasma membrane	50.26	49.5
CDY30731	Canola	plasma membrane	50.43	49.42
Solyc06g071570.2.1	Tomato	plasma membrane	48.55	49.31
Bra029248.1-P	Field mustard	plasma membrane	51.11	49.02
CDX84344	Canola	plasma membrane	49.91	48.67
PGSC0003DMT400069660	Potato	plasma membrane	47.87	48.62
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	50.94	48.54
CDY45754	Canola	plasma membrane	49.74	48.51
CDY00315	Canola	plasma membrane	50.43	48.37
Bra010111.1-P	Field mustard	plasma membrane	50.43	48.37
Bra019521.1-P	Field mustard	plasma membrane	50.09	48.12
KRH56969	Soybean	plasma membrane	50.09	48.12
Bra035885.1-P	Field mustard	peroxisome	46.17	48.05
KRH03412	Soybean	plasma membrane	47.87	47.95
CDY16763	Canola	peroxisome	46.85	47.91
KRH03409	Soybean	plasma membrane	49.91	47.88
CDX87266	Canola	peroxisome	46.68	47.82
CDX81902	Canola	cytosol, peroxisome, plasma membrane	48.04	47.64
CDY26715	Canola	plasma membrane	47.02	47.59
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	47.53	47.53
Bra025695.1-P	Field mustard	plasma membrane	46.85	47.41
CDX83801	Canola	cytosol, peroxisome, plasma membrane	47.7	47.38
CDY21692	Canola	plasma membrane	46.17	47.21
AT3G47960.1	Thale cress	plasma membrane	50.94	47.01
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.23	46.99
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	47.36	46.96
CDY51783	Canola	cytosol, peroxisome, plasma membrane	48.21	46.93
CDX83027	Canola	cytosol, peroxisome, plasma membrane	48.04	46.84
CDX68450	Canola	cytosol, peroxisome, plasma membrane	49.06	46.83
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.89	46.67
CDY36913	Canola	cytosol, peroxisome, plasma membrane	48.89	46.67
CDY21805	Canola	cytosol, peroxisome, plasma membrane	49.23	46.54
CDY69433	Canola	golgi, peroxisome, plastid	49.74	46.06
CDX96690	Canola	plasma membrane	47.02	45.47
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	22.66	43.89
Os06t0264500-01	Rice	extracellular	41.91	41.21
CDY16764	Canola	cytosol, mitochondrion, plasma membrane, plastid	41.57	41.15
Os01t0913300-01	Rice	plasma membrane	41.4	40.5
Os05t0410500-01	Rice	cytosol, plasma membrane	37.82	38.34
Os01t0960900-00	Rice	cytosol	18.06	38.27
Os05t0411100-00	Rice	cytosol, nucleus, plasma membrane	39.35	37.38
Os01t0761400-01	Rice	plasma membrane	35.78	36.59
Os05t0338900-00	Rice	plasma membrane	12.44	35.61
Os05t0410900-02	Rice	plasma membrane	35.95	35.28
Os01t0761500-01	Rice	plasma membrane	35.43	35.25
Os04t0660900-01	Rice	plasma membrane, plastid	37.82	35.18
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	11.58	30.63
Bra016534.1-P	Field mustard	plastid	48.38	27.52
VIT_17s0000g05550.t01	Wine grape	plasma membrane	52.47	17.97
Os07t0190600-01	Rice	cytosol, plastid	0.17	0.18
Os01t0960800-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EntrezGene:4352906	ProteinID:ABG22108.1	ProteinID:BAF30397.1	ProteinID:BAT18274.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
EnsemblPlantsGene:Os12g0638300	EnsemblPlants:Os12t0638300-01	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF59
UniProt:Q0ILL8	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0000680B5C	RefSeq:XP_015620479.1	SEG:seg

Description

Similar to Peptide transporter. (Os12t0638300-01)

Coordinates

chr12:-:27359469..27361454

Molecular Weight (calculated)

64147.2 Da

IEP (calculated)

9.245

GRAVY (calculated)

0.338

Length

587 amino acids

Sequence
(BLAST)

001: MDAAAAMEKQ QQPGEKKITG GEEEEEEEVI SSVRYRGWKS MPYVIGNETF EKLGTIGTTA NLLVYLTTVY HLPSVRAATL LNFFSGTTNL APLLGAFLSD
101: TFLGRYTTIA AASLASCLGM LVLTLTAAIP SLHPPPCTAS SSSSSCQGPT HGQLAALLAA FAFLVVGAGG IRPCNLAFGA DQFDPRTDSG RRGIASFFNW
201: YYFTFTVAMM LSATLIIYLQ SNVSWAIGLA VPAALMAISC ALFFMGTRLY VRVRPEGSPF TSFARVIVAA VRKRRVPAPA SADDLFDPPH QSKLVAKIAY
301: TDQFRCLDKA AVVTPESRSS PWRLCTVQQV EEVKCLARII PVWSAGIVYF IVVTQLGTFV VLQALQMDRR LTRWWAFEVP AGSMVVFNMM AMTVWIPVYD
401: RVVVPALRRV TGKEGGISQL QRIGVGLVLS VATMVVAAAV EQRRRRLGAV GVKMSFLWLV PQQVAAGMSE AFAAIGQTEL YYRQFPENMR SVAGALFFLA
501: FALANYASGF MVAAVHRTTG WLAQDLNHAR LDLFYLTVAA IAAANVCYFL LCARWYRFKN TTIADHVELP DYHHHQPGTA NTIASKV

Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)

001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA

Arabidopsis Description

NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.