Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g071570.2.1 | Tomato | plasma membrane | 86.14 | 45.16 |
| Solyc03g113430.2.1 | Tomato | plasma membrane | 59.08 | 30.6 |
| Solyc03g113420.2.1 | Tomato | plasma membrane | 56.77 | 29.3 |
| GSMUA_Achr5P15010_001 | Banana | cytosol, peroxisome, plasma membrane | 52.15 | 28.21 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 52.15 | 26.83 |
| Zm00001d031213_P001 | Maize | plasma membrane | 44.88 | 26.72 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 52.15 | 26.64 |
| Zm00001d013529_P002 | Maize | plasma membrane | 51.82 | 26.57 |
| Os03t0687000-02 | Rice | plasma membrane | 50.16 | 25.89 |
| GSMUA_Achr5P15030_001 | Banana | cytosol | 40.26 | 25.74 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 49.51 | 25.17 |
| GSMUA_Achr4P22320_001 | Banana | plasma membrane | 41.91 | 25.1 |
| TraesCS4A01G283900.1 | Wheat | golgi, unclear | 49.17 | 24.96 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.84 | 24.87 |
| HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 49.17 | 24.79 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 44.22 | 22.79 |
| TraesCS2A01G045500.1 | Wheat | plasma membrane | 44.88 | 22.7 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 43.89 | 22.66 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 44.55 | 22.54 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 44.22 | 22.37 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.55 | 22.31 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.21 | 22.31 |
| TraesCS5A01G037900.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.21 | 22.24 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 43.89 | 22.09 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 43.23 | 22.05 |
| HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 43.89 | 22.02 |
| HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 44.55 | 21.99 |
| EER98133 | Sorghum | plasma membrane | 47.19 | 21.97 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.22 | 21.93 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 43.89 | 21.91 |
| TraesCS5A01G004400.1 | Wheat | cytosol, nucleus, plasma membrane | 44.22 | 21.9 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 43.89 | 21.52 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 42.24 | 21.44 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 41.91 | 20.92 |
| Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 20.79 | 20.0 |
| HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 44.22 | 19.53 |
| Solyc05g009500.2.1 | Tomato | plasma membrane | 34.32 | 18.15 |
| Solyc05g006000.2.1 | Tomato | plasma membrane | 33.66 | 17.41 |
| Solyc08g066940.2.1 | Tomato | plasma membrane | 29.37 | 17.35 |
| Solyc03g113440.2.1 | Tomato | plasma membrane | 33.99 | 17.28 |
| Solyc05g006010.2.1 | Tomato | plasma membrane | 33.33 | 17.27 |
| Solyc05g005950.2.1 | Tomato | plasma membrane | 32.67 | 17.19 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 30.03 | 17.14 |
| Solyc05g005980.2.1 | Tomato | plasma membrane | 32.67 | 17.1 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 30.69 | 16.79 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 30.03 | 16.67 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 29.7 | 16.39 |
| Solyc12g044310.1.1 | Tomato | plasma membrane | 33.66 | 16.22 |
| Solyc05g005970.2.1 | Tomato | plasma membrane | 31.02 | 16.21 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 27.39 | 16.15 |
| Solyc05g005960.2.1 | Tomato | plasma membrane | 30.69 | 16.15 |
| Solyc05g005920.2.1 | Tomato | plasma membrane | 31.02 | 16.12 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 29.7 | 16.1 |
| Solyc05g005940.2.1 | Tomato | plasma membrane | 30.69 | 16.06 |
| Solyc04g005070.2.1 | Tomato | plasma membrane | 30.36 | 16.06 |
| Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 30.69 | 15.87 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 28.38 | 15.84 |
| Solyc03g120560.2.1 | Tomato | plasma membrane | 31.02 | 15.59 |
| Solyc03g120550.2.1 | Tomato | plasma membrane | 30.69 | 14.53 |
| Solyc12g095810.1.1 | Tomato | plasma membrane | 30.69 | 14.16 |
| Solyc05g005990.2.1 | Tomato | plasma membrane | 20.79 | 13.73 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 24.42 | 13.48 |
| Solyc05g005910.2.1 | Tomato | plasma membrane | 33.33 | 13.38 |
| VIT_17s0000g05550.t01 | Wine grape | plasma membrane | 64.36 | 11.38 |
Protein Annotations
| EnsemblPlants:Solyc06g071090.1.1 | EnsemblPlantsGene:Solyc06g071090.1 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF59 | PFAM:PF00854 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002766F0F | UniProt:K4C8I2 | MapMan:24.2.2.9 | : | : | : |
Description
No Description!
Coordinates
chr6:+:43667664..43669102
Molecular Weight (calculated)
33712.6 Da
IEP (calculated)
9.876
GRAVY (calculated)
0.341
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLTVIVYV QTSVSWSLGL AILTIMRFLS CALFFVGTKI YVRLVPKGSP LSTVAQVLVA AIKKRHLQLP EQPCYSLFNH VPSNSLTSLL PYTDQFRFLS
101: KAAVKTPEDQ INSSDGSAVN PWRLCSIQQV EEVKCLLRVI PIWVAGTIYY VSVVQSQNYV IFQALQSDNQ LGKEDGISLL QKMGIGIFLS IVTMFISGIV
201: EDRRRTLTMT RPMLQMTQGK GAISSMSGLW LIPQMALSGL SKAFTLISEN EFFYKQCPET MRSIAASFFF VGLAGSSYLS SIIKSHSTIM YNKQLNRIFP
301: SVT
101: KAAVKTPEDQ INSSDGSAVN PWRLCSIQQV EEVKCLLRVI PIWVAGTIYY VSVVQSQNYV IFQALQSDNQ LGKEDGISLL QKMGIGIFLS IVTMFISGIV
201: EDRRRTLTMT RPMLQMTQGK GAISSMSGLW LIPQMALSGL SKAFTLISEN EFFYKQCPET MRSIAASFFF VGLAGSSYLS SIIKSHSTIM YNKQLNRIFP
301: SVT
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.