Factsheet for Solyc12g095810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075590	Potato	plasma membrane	84.02	95.83
KRH62051	Soybean	plasma membrane	43.07	49.82
Solyc12g044310.1.1	Tomato	plasma membrane	43.68	45.63
Solyc03g120560.2.1	Tomato	plasma membrane	41.4	45.11
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.18	45.05
CDX91207	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.59	44.54
CDY67993	Canola	plasma membrane	36.38	42.99
AT5G11570.1	Thale cress	plasma membrane	31.05	42.41
Solyc05g005920.2.1	Tomato	plasma membrane	36.83	41.51
Solyc08g066940.2.1	Tomato	plasma membrane	32.12	41.13
Solyc05g005970.2.1	Tomato	plasma membrane	36.23	41.03
Solyc04g005070.2.1	Tomato	plasma membrane	35.77	41.01
Solyc03g120550.2.1	Tomato	plasma membrane	39.88	40.94
Solyc05g005980.2.1	Tomato	plasma membrane	36.07	40.93
Solyc05g005940.2.1	Tomato	plasma membrane	35.92	40.76
Solyc05g005950.2.1	Tomato	plasma membrane	35.16	40.1
Solyc05g005960.2.1	Tomato	plasma membrane	35.01	39.93
Solyc05g005990.2.1	Tomato	plasma membrane	27.85	39.87
Solyc05g006010.2.1	Tomato	plasma membrane	35.01	39.32
Solyc05g006000.2.1	Tomato	plasma membrane	34.86	39.08
Solyc05g005910.2.1	Tomato	plasma membrane	39.42	34.3
Solyc05g009500.2.1	Tomato	plasma membrane	28.61	32.81
Solyc03g113430.2.1	Tomato	plasma membrane	28.46	31.97
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	26.33	31.68
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	29.22	31.63
Solyc03g113420.2.1	Tomato	plasma membrane	28.01	31.35
Solyc06g071570.2.1	Tomato	plasma membrane	27.4	31.14
Solyc06g075500.2.1	Tomato	plasma membrane	25.72	31.12
Solyc06g075440.1.1	Tomato	plasma membrane	25.11	31.07
Solyc06g075480.2.1	Tomato	plasma membrane	26.18	31.05
Solyc06g075490.1.1	Tomato	plasma membrane	25.88	30.97
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	14.16	30.69
Solyc11g072560.1.1	Tomato	plasma membrane	23.74	30.35
Solyc11g072570.1.1	Tomato	plasma membrane	24.96	29.34
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	13.55	28.25
Solyc03g113440.2.1	Tomato	plasma membrane	25.57	28.19
Solyc11g072580.1.1	Tomato	plasma membrane	23.14	27.69
CDX69747	Canola	plasma membrane	36.07	15.33
Bra008953.1-P	Field mustard	plasma membrane	36.07	15.33

Protein Annotations

MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:K4DH54
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157
SUPFAM:SSF103473	EnsemblPlantsGene:Solyc12g095810.1	EnsemblPlants:Solyc12g095810.1.1	TMHMM:TMhelix	UniParc:UPI0002769A03	SEG:seg

Description

Protein NRT1/ PTR FAMILY 1.3 [Source:Projected from Arabidopsis thaliana (AT5G11570) UniProtKB/Swiss-Prot;Acc:Q9LYD5]

Coordinates

chr12:+:64929667..64934971

Molecular Weight (calculated)

72914.0 Da

IEP (calculated)

5.707

GRAVY (calculated)

0.331

Length

657 amino acids

Sequence
(BLAST)

001: MVPRRNFNGG KSNEVGAKTN SFFLQYSSVL FDQLFCLYIH VVDAWLLSQC FNCQWWTVSD GNKIERVKEF FFFLGYGLIV NHMEDLLCEK GEMIEQSLLL
101: DDTETQKGGF RTLPFILGNA ALTNAATSAL TPNMILYLMN EYHMDMTTGS NIIYMWSAVT NIAPVIGAFM ADSFVGRFQM IGLGSVVTLV GMLLFWLTSV
201: IPQARPPPCD SNNICRSAET FQLFFLCFSL GIVAIGAGAV KSSSLAFGSD QLKREIYQDN ARLMERYFSW YYALYALSIL VALTCLVYIQ VNMGWALGFG
301: APVLLMLFST LLIYLGTPFF VKLKPKSTLI TGLFQVIVAS YRNRCPKLSS QSEGIQYHQR KGSTVVLPSE KLRFLNKACI IQDPQLDLSP DGEATDPWRL
401: CTVDQVEELK ALLKVVPIWL TGVLLSINIS QNTFPVLQAN TMDRHIGSSF EIPAASFGIF AVISAILWIV LYDYLILPTA SKMTGKPAHF STKERMGFGL
501: FLSFLSVLVV AVVEGVRRSI AIKEGYSDDP EGMIPMSAMF LLPQNSLTGF AEALHAIGQN EFYISEFPRS MSSVAASLLG VGMGVGSLLA SSIMSTIDDL
601: TKRGGEESWV SSNINKGHYD YYYLVLAGFS LVNILCYIVC SKAYGPCKEE VMEEEKP

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.