CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075590	Potato	plasma membrane	50.18	49.48
KRH44330	Soybean	plasma membrane	50.0	48.38
KRH47260	Soybean	plasma membrane	50.53	47.36
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	50.53	47.28
CDX91207	Canola	cytosol, endoplasmic reticulum, plasma membrane	28.7	46.84
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	49.3	46.59
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	50.35	46.43
AT5G11570.1	Thale cress	plasma membrane	39.08	46.15
KRH47259	Soybean	plasma membrane	49.3	45.83
KRH60261	Soybean	plasma membrane	45.77	45.38
KRH41549	Soybean	plasma membrane	45.95	45.08
CDY67993	Canola	plasma membrane	43.66	44.6
KRH16178	Soybean	plasma membrane	44.89	43.59
KRH04819	Soybean	plasma membrane	44.19	43.5
Solyc12g095810.1.1	Tomato	plasma membrane	49.82	43.07
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	39.61	40.91
KRH74756	Soybean	plastid	37.15	34.03
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	35.04	33.61
KRH69380	Soybean	plastid	37.15	33.55
KRH75379	Soybean	plasma membrane	28.35	33.54
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	35.21	33.5
KRH75378	Soybean	plasma membrane	33.8	33.33
KRH56968	Soybean	plasma membrane	34.86	33.22
KRH03412	Soybean	plasma membrane	34.15	33.11
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	36.09	32.96
KRG99182	Soybean	plasma membrane	33.1	32.75
KRG95048	Soybean	cytosol, nucleus, plasma membrane	35.04	32.62
KRH66693	Soybean	mitochondrion	35.04	32.62
KRH22952	Soybean	plasma membrane	30.99	32.53
KRH56969	Soybean	plasma membrane	33.98	31.59
KRH03409	Soybean	plasma membrane	33.98	31.54
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	33.8	31.22
KRH66698	Soybean	plasma membrane	29.4	31.21
KRH56967	Soybean	peroxisome	31.87	30.32
KRH00056	Soybean	cytosol, peroxisome, plasma membrane	30.46	29.73
CDX69747	Canola	plasma membrane	43.84	16.11
Bra008953.1-P	Field mustard	plasma membrane	43.84	16.11

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100809846	MapMan:24.2.2.9	EMBL:ACUP02002216	EnsemblPlantsGene:GLYMA_04G082700	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1JUU4	InterPro:IPR020846	EnsemblPlants:KRH62051	ProteinID:KRH62051
ProteinID:KRH62051.1	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654
PANTHER:PTHR11654:SF197	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00023394E5	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:6972207..6975822

Molecular Weight (calculated)

62099.2 Da

IEP (calculated)

7.351

GRAVY (calculated)

0.390

Length

568 amino acids

Sequence
(BLAST)

001: MEGLSEMESV IEEPLLSKQN SNAKGGFRTL PFIIANEAFE RLASLGLMPN MILYLTREYG MQTAGATNFL LLWSAASNFT PFVGAVLSDS YVGRYSMIAF
101: GSIASLLGMV LLWLTTLIPL SKPLCNQFTN SCNNSPTTIH LLILHSSFAL MSIGAGGIRS SSLAFGVDQL SKRDKNAGIK ESYFSWYYAI VAMSSLIGLT
201: VVVYIQDNMG WAVGFGIPVI LMFVATASFF LASPFYVMVE VKRNMLSGLA QVLVASYKNR LLQLPQETEN GIYHLEKDSD LLMPTEKLRF LNKACLIRNS
301: LQDLTPEGRA LNPWNLCTVD QVEELKALIK IVPIWSTGIM MGVNISQGSL LVLEASSMDR HITSNFEIPS GSFVTFMIVS LVLWVIIYDR ILVPVASKIK
401: GSPACIGAKQ KMGIGLLTGC IAIASLAVVE DIRRKIAIEK GYEDQPQAVV NMSALWLLPR QILNGLAEAL GVVGQNEFFL TELPQSMSSL ASTLNGLGSS
501: VANLVASFIL SVVDNVTGGG GHESWLSSNI NKGHYDYYYT LICALCFVNF VYFLYCSKSY GPCKNRGK

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.