Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008953.1-P | Field mustard | plasma membrane | 99.74 | 99.74 |
| CDY68532 | Canola | cytosol | 34.22 | 98.69 |
| CDY67993 | Canola | plasma membrane | 33.89 | 94.24 |
| CDX91207 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 18.24 | 81.03 |
| AT5G11570.1 | Thale cress | plasma membrane | 23.93 | 76.92 |
| KRH62051 | Soybean | plasma membrane | 16.11 | 43.84 |
| CDY70561 | Canola | plasma membrane | 14.94 | 42.46 |
| CDY28371 | Canola | plasma membrane | 13.26 | 42.18 |
| CDY69519 | Canola | plasma membrane | 7.89 | 41.78 |
| PGSC0003DMT400075590 | Potato | plasma membrane | 15.52 | 41.67 |
| CDY30141 | Canola | plasma membrane | 15.98 | 41.65 |
| CDY20187 | Canola | plasma membrane | 7.89 | 41.5 |
| CDX97728 | Canola | plasma membrane | 15.91 | 41.48 |
| CDY69522 | Canola | plasma membrane | 7.83 | 41.44 |
| CDY51257 | Canola | plastid | 12.87 | 40.95 |
| Solyc12g095810.1.1 | Tomato | plasma membrane | 15.33 | 36.07 |
| CDY40280 | Canola | plasma membrane | 12.03 | 32.75 |
| CDY65728 | Canola | cytosol | 4.2 | 32.66 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 11.9 | 32.39 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 11.77 | 32.04 |
| CDY11648 | Canola | plasma membrane | 11.25 | 31.58 |
| CDY38766 | Canola | plasma membrane | 11.13 | 31.22 |
| CDY38595 | Canola | cytosol, peroxisome, plasma membrane | 11.9 | 31.08 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 11.71 | 30.47 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 11.64 | 30.46 |
| CDY07377 | Canola | cytosol, peroxisome, plasma membrane | 11.71 | 30.37 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 11.77 | 29.98 |
| CDY69402 | Canola | plasma membrane | 5.76 | 29.87 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 11.58 | 29.49 |
| CDY45756 | Canola | plasma membrane | 10.87 | 29.42 |
| CDY04237 | Canola | cytosol, peroxisome, plasma membrane | 11.32 | 29.41 |
| CDY11647 | Canola | plastid | 11.77 | 29.4 |
| CDY38767 | Canola | plastid | 11.77 | 29.26 |
| CDX81902 | Canola | cytosol, peroxisome, plasma membrane | 11.19 | 29.22 |
| CDX83801 | Canola | cytosol, peroxisome, plasma membrane | 11.13 | 29.1 |
| CDY09846 | Canola | plasma membrane | 8.02 | 28.9 |
| CDY26715 | Canola | plasma membrane | 10.8 | 28.79 |
| CDY21692 | Canola | plasma membrane | 10.67 | 28.75 |
| CDY54537 | Canola | cytosol, peroxisome, plasma membrane | 11.45 | 28.64 |
| CDX99152 | Canola | plasma membrane | 10.28 | 28.55 |
| CDY05592 | Canola | plasma membrane | 10.48 | 28.32 |
| CDY52504 | Canola | plasma membrane | 10.48 | 28.32 |
| CDX86030 | Canola | plasma membrane | 4.98 | 28.31 |
| CDX86198 | Canola | peroxisome | 10.41 | 28.3 |
| CDY16763 | Canola | peroxisome | 10.48 | 28.22 |
| CDX87266 | Canola | peroxisome | 10.41 | 28.1 |
| CDX84344 | Canola | plasma membrane | 10.93 | 28.07 |
| CDY30731 | Canola | plasma membrane | 10.87 | 28.05 |
| CDY18499 | Canola | plasma membrane | 10.09 | 28.01 |
| CDY52480 | Canola | plasma membrane | 8.34 | 27.98 |
| CDY00315 | Canola | plasma membrane | 11.06 | 27.94 |
| CDY36913 | Canola | cytosol, peroxisome, plasma membrane | 11.06 | 27.8 |
| CDY45754 | Canola | plasma membrane | 10.8 | 27.74 |
| CDX83027 | Canola | cytosol, peroxisome, plasma membrane | 10.74 | 27.57 |
| CDY51783 | Canola | cytosol, peroxisome, plasma membrane | 10.74 | 27.53 |
| CDX96690 | Canola | plasma membrane | 10.8 | 27.51 |
| CDX68450 | Canola | cytosol, peroxisome, plasma membrane | 10.93 | 27.48 |
| CDY48147 | Canola | plasma membrane | 9.77 | 27.4 |
| CDY12696 | Canola | plasma membrane | 9.12 | 27.27 |
| CDX81495 | Canola | plasma membrane | 9.12 | 27.17 |
| CDX99151 | Canola | plasma membrane | 9.64 | 26.85 |
| CDY69433 | Canola | golgi, peroxisome, plastid | 10.87 | 26.5 |
| CDX86031 | Canola | plasma membrane | 2.65 | 26.45 |
| CDY21805 | Canola | cytosol, peroxisome, plasma membrane | 10.61 | 26.41 |
| CDY16764 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 9.64 | 25.13 |
| CDX96007 | Canola | cytosol, peroxisome, plasma membrane | 10.35 | 23.12 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:24.2.2.9 | GO:A0A078BZC4 | EnsemblPlants:CDX69747 | ProteinID:CDX69747 | ProteinID:CDX69747.1 |
| InterPro:EMC1 | InterPro:EMC1_C | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:0072546 | EnsemblPlantsGene:GSBRNA2T00135788001 |
| InterPro:IPR015943 | InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | PFAM:PF07774 |
| PFAM:PF13360 | InterPro:POT_fam | InterPro:PQQ_beta_propeller_repeat | InterPro:PQQ_repeat | PANTHER:PTHR21573 | InterPro:Quinoprotein_ADH-like_supfam |
| SMART:SM00564 | SUPFAM:SSF103473 | SUPFAM:SSF50998 | TMHMM:TMhelix | UniParc:UPI0004EE7E42 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g20960D
Coordinates
chrLK031790:+:1659022..1667473
Molecular Weight (calculated)
171431.0 Da
IEP (calculated)
6.824
GRAVY (calculated)
0.147
Length
1546 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDQEALLVGK ATDQHPEKRT VSTISCILAS QALEKLAYYG LVPNMILYLT VEYGMGTTEA ANILFLWSAA TNFFPLIGAF IADSYTGRFP LIGFGSSTSL
0101: LGMLSLWLAA MIQPKCDKSI DVCQPTTPFQ LLLLYSFFTL TSIGAGGVRS SCLAFAADQL QLNSTTCIST TALETLFNWY YFSVMLAYFL SESLLVFVQT
0201: KYGWQIGFGV SLAVMALSVA LFFVASPFYV KFKCEPSLVS GLFQVLVAAF RNQHVDLASE EHVISYHHET GPSFSIPSQK LRYLNKACAT SNPRQDLTLT
0301: GNSQNPWKLC TVQQVEDFKS LVNVLPIWST GIILSLVTAC QASFIVLQAK AMDRRTFIKG FEIPPGCYGV FMIISFVVFL VIYDIVVVPL VSWALRKPRL
0401: GVMVRMGAGI AISVLCISTL AIVEYVRRKR AREEGGTMLS AMWLLPYMLL GGISEALISI AQNEFFYSEL PKSMSSVATT LSGLNMAAAS LVSSWIFTAV
0501: DTATCRSWIT EDINEGHLDY YYWLMTAFSL LNVVYFVWCS KAYAKLMTKA PFSLTRSVKK TKPANAMAMA LRLYLLLLVF LSSAIVSFSL YEDQVGLMDW
0601: HQRYIGKVKH AVFHTQKTGR KRVIVSTEEN VVASLDLRHG EIFWRHVLGT KDAIDGVDIA LGKYVITLSS EGSMVRAWNL PDGQMVWETS LHSAQHSKSL
0701: LSVPVNLKVD KDYPILVFGG GYLHAVSPID GEVLWKKDFT AEGFEVQRVL QPLESSIIYV LGFLHSSEAI VYQIDSKSGE VVAEKSKAFP GGFSGEVASV
0801: SNDKVVVLDS TRSILVTISF VDEEISFQKT LISDLVEDSG EAEILSPLLS NMLAVKVNKR TIFVRVGDQG KLEMVDSLSD ETAMSDSLPV ADDQVAFASV
0901: HHEGSKIHLT VKLVDDLDTV LLRESIQMDQ HRGRVDKVFI NNYIKTDRSN GFRALIVMED HSLLLLQQGA IVWSREEGLA SVTDVTTAEL PVEKDGVSVA
1001: KVEHTLVDWL KGHILKLKGS LLLASPEDVV AIQEMRMKSS GRSKLTRDHN GFRKLFIALT RAGKLYALHT GDGRIVWSTL LKSPACARPS GISLYQWQVP
1101: HHHAMDENPS VLVVGRCGSD SSSPGVLSFV DVYTGKEISS SDIGHSVVQV MPLPFTDSTE QRLHLIADTD GHVHLYPKTS EALSIFQREF QNVYWYNVEG
1201: DDGIVRGHGM KSSCSGETAD EYCFTTRELW TVVFPSESEK IISTLTRKPN EVVHTQAKVS TDQDVLYKYV SRNLLFVATV SPKGAGEIGS VTPEESALVV
1301: YLIDTVTGRI LHRLSHQGCQ GPVHAVFSEN WVVYHYFNLR AHKYEVTVVE IYDQSRAENK NVWKLVLGKH NLTAPISSYS RPEMFTKSQS YFFPQSVKTI
1401: AVTSTAKGIT SKQLLIGTIG DQILALDKRF VDPRRTLNPS QAEKEEGIIP LTDSLPIIPQ SYITHSLKVE GLRGIVTAPA KLESTTHVFA YGVDLFYTRL
1501: APSKTYDSLT DDFSYALLLI TIVALVAAIY ITWALSEKKE LSEKWR
0101: LGMLSLWLAA MIQPKCDKSI DVCQPTTPFQ LLLLYSFFTL TSIGAGGVRS SCLAFAADQL QLNSTTCIST TALETLFNWY YFSVMLAYFL SESLLVFVQT
0201: KYGWQIGFGV SLAVMALSVA LFFVASPFYV KFKCEPSLVS GLFQVLVAAF RNQHVDLASE EHVISYHHET GPSFSIPSQK LRYLNKACAT SNPRQDLTLT
0301: GNSQNPWKLC TVQQVEDFKS LVNVLPIWST GIILSLVTAC QASFIVLQAK AMDRRTFIKG FEIPPGCYGV FMIISFVVFL VIYDIVVVPL VSWALRKPRL
0401: GVMVRMGAGI AISVLCISTL AIVEYVRRKR AREEGGTMLS AMWLLPYMLL GGISEALISI AQNEFFYSEL PKSMSSVATT LSGLNMAAAS LVSSWIFTAV
0501: DTATCRSWIT EDINEGHLDY YYWLMTAFSL LNVVYFVWCS KAYAKLMTKA PFSLTRSVKK TKPANAMAMA LRLYLLLLVF LSSAIVSFSL YEDQVGLMDW
0601: HQRYIGKVKH AVFHTQKTGR KRVIVSTEEN VVASLDLRHG EIFWRHVLGT KDAIDGVDIA LGKYVITLSS EGSMVRAWNL PDGQMVWETS LHSAQHSKSL
0701: LSVPVNLKVD KDYPILVFGG GYLHAVSPID GEVLWKKDFT AEGFEVQRVL QPLESSIIYV LGFLHSSEAI VYQIDSKSGE VVAEKSKAFP GGFSGEVASV
0801: SNDKVVVLDS TRSILVTISF VDEEISFQKT LISDLVEDSG EAEILSPLLS NMLAVKVNKR TIFVRVGDQG KLEMVDSLSD ETAMSDSLPV ADDQVAFASV
0901: HHEGSKIHLT VKLVDDLDTV LLRESIQMDQ HRGRVDKVFI NNYIKTDRSN GFRALIVMED HSLLLLQQGA IVWSREEGLA SVTDVTTAEL PVEKDGVSVA
1001: KVEHTLVDWL KGHILKLKGS LLLASPEDVV AIQEMRMKSS GRSKLTRDHN GFRKLFIALT RAGKLYALHT GDGRIVWSTL LKSPACARPS GISLYQWQVP
1101: HHHAMDENPS VLVVGRCGSD SSSPGVLSFV DVYTGKEISS SDIGHSVVQV MPLPFTDSTE QRLHLIADTD GHVHLYPKTS EALSIFQREF QNVYWYNVEG
1201: DDGIVRGHGM KSSCSGETAD EYCFTTRELW TVVFPSESEK IISTLTRKPN EVVHTQAKVS TDQDVLYKYV SRNLLFVATV SPKGAGEIGS VTPEESALVV
1301: YLIDTVTGRI LHRLSHQGCQ GPVHAVFSEN WVVYHYFNLR AHKYEVTVVE IYDQSRAENK NVWKLVLGKH NLTAPISSYS RPEMFTKSQS YFFPQSVKTI
1401: AVTSTAKGIT SKQLLIGTIG DQILALDKRF VDPRRTLNPS QAEKEEGIIP LTDSLPIIPQ SYITHSLKVE GLRGIVTAPA KLESTTHVFA YGVDLFYTRL
1501: APSKTYDSLT DDFSYALLLI TIVALVAAIY ITWALSEKKE LSEKWR
001: MAIRVFLTLL LFLSSAILSF SLYEDQAGLT DWHQRYIGKV KHAVFHTQKT GRKRVIVSTE ENVVASLDLR HGEIFWRHVL GTKDAIDGVG IALGKYVITL
101: SSEGSTLRAW NLPDGQMVWE TSLHTAQHSK SLLSVPINLK VDKDYPITVF GGGYLHAVSA IDGEVLWKKD FTAEGFEVQR VLQAPGSSII YVLGFLHSSE
201: AVVYQIDSKS GEVVAQKSTV FPGGFSGEIS SVSSDKVVVL DSTRSILVTI GFIDGDISFQ KTPISDLVED SGTAEILSPL LSNMLAVKVN KRTIFVNVGD
301: KGKLEVVDSL SDETAMSDSL PVADDQEAFA SVHHEGSRIH LMVKLVNDLN NVLLRETIQM DQNRGRVHKV FMNNYIRTDR SNGFRALIVM EDHSLLLLQQ
401: GAIVWSREEG LASVTDVTTA ELPLEKDGVS VAKVEHTLFE WLKGHVLKLK GSLLLASPED VVAIQDLRVK SSGKNKLTRD HNGFRKLILA LTRAGKLFAL
501: HTGDGRIVWS MLLNSPSQSQ SCERPNGVSL YQWQVPHHHA MDENPSVLVV GKCGSDSSAP GVLSFVDVYT GKEISSSDIG HSVVQVMPLP ITDSKEQRLH
601: LIADTVGHVH LYPKTSEALS IFQREFQNVY WYTVEADDGI IRGHVMKGSC SGETADEYCF TTRELWTVVF PSESEKIIST LTRKPNEVVH TQAKVNTDQD
701: LLYKYVSRNL LFVATVSPKG AGEIGSVTPE ESSLVVYLID TITGRILHRL SHQGCQGPVH AVFSENWVVY HYFNLRAHKY EVTVVEIYDQ SRAENKNVWK
801: LILGKHNLTA PITSYSRPEV FTKSQSYFFA QSVKTIAVTS TAKGITSKQL LIGTIGDQIL ALDKRFVDPR RTLNPSQAEK EEGIIPLTDT LPIIPQAYVT
901: HSHKVEGLRG IVTAPSKLES TTHVFAYGVD LFYTRLAPSK TYDSLTDDFS YALLLITIVA LVAAIYITWV LSEKKELSEK WR
101: SSEGSTLRAW NLPDGQMVWE TSLHTAQHSK SLLSVPINLK VDKDYPITVF GGGYLHAVSA IDGEVLWKKD FTAEGFEVQR VLQAPGSSII YVLGFLHSSE
201: AVVYQIDSKS GEVVAQKSTV FPGGFSGEIS SVSSDKVVVL DSTRSILVTI GFIDGDISFQ KTPISDLVED SGTAEILSPL LSNMLAVKVN KRTIFVNVGD
301: KGKLEVVDSL SDETAMSDSL PVADDQEAFA SVHHEGSRIH LMVKLVNDLN NVLLRETIQM DQNRGRVHKV FMNNYIRTDR SNGFRALIVM EDHSLLLLQQ
401: GAIVWSREEG LASVTDVTTA ELPLEKDGVS VAKVEHTLFE WLKGHVLKLK GSLLLASPED VVAIQDLRVK SSGKNKLTRD HNGFRKLILA LTRAGKLFAL
501: HTGDGRIVWS MLLNSPSQSQ SCERPNGVSL YQWQVPHHHA MDENPSVLVV GKCGSDSSAP GVLSFVDVYT GKEISSSDIG HSVVQVMPLP ITDSKEQRLH
601: LIADTVGHVH LYPKTSEALS IFQREFQNVY WYTVEADDGI IRGHVMKGSC SGETADEYCF TTRELWTVVF PSESEKIIST LTRKPNEVVH TQAKVNTDQD
701: LLYKYVSRNL LFVATVSPKG AGEIGSVTPE ESSLVVYLID TITGRILHRL SHQGCQGPVH AVFSENWVVY HYFNLRAHKY EVTVVEIYDQ SRAENKNVWK
801: LILGKHNLTA PITSYSRPEV FTKSQSYFFA QSVKTIAVTS TAKGITSKQL LIGTIGDQIL ALDKRFVDPR RTLNPSQAEK EEGIIPLTDT LPIIPQAYVT
901: HSHKVEGLRG IVTAPSKLES TTHVFAYGVD LFYTRLAPSK TYDSLTDDFS YALLLITIVA LVAAIYITWV LSEKKELSEK WR
Arabidopsis Description
Catalytics [Source:UniProtKB/TrEMBL;Acc:F4JXW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.