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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:extracellular, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:extracellular
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009996.1-P Field mustard peroxisome 98.48 79.79
CDX86198 Canola peroxisome 98.48 79.79
CDY52504 Canola plasma membrane 87.85 70.8
CDY05592 Canola plasma membrane 87.64 70.63
AT5G28470.2 Thale cress plasma membrane 81.78 67.2
KRH56967 Soybean peroxisome 54.66 42.21
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 53.58 41.51
Solyc03g113440.2.1 Tomato plasma membrane 53.15 41.11
CDY40280 Canola plasma membrane 39.48 32.04
CDY28441 Canola cytosol, peroxisome, plasma membrane 39.26 31.87
CDY25813 Canola cytosol, peroxisome, plasma membrane 39.05 31.69
CDY28371 Canola plasma membrane 33.19 31.48
CDY51257 Canola plastid 32.54 30.86
CDY48389 Canola cytosol, peroxisome, plasma membrane 40.35 30.64
CDY56086 Canola cytosol, peroxisome, plasma membrane 39.26 30.63
CDY23545 Canola cytosol, peroxisome, plasma membrane 40.13 30.48
CDY53067 Canola cytosol, peroxisome, plasma membrane 39.05 30.3
CDY45756 Canola plasma membrane 37.53 30.3
CDY26715 Canola plasma membrane 37.09 29.48
CDY09846 Canola plasma membrane 27.33 29.37
CDX83801 Canola cytosol, peroxisome, plasma membrane 37.53 29.27
CDY11647 Canola plastid 39.05 29.08
CDY38767 Canola plastid 38.83 28.78
CDX81902 Canola cytosol, peroxisome, plasma membrane 36.88 28.72
CDX68450 Canola cytosol, peroxisome, plasma membrane 38.18 28.62
CDY00315 Canola plasma membrane 37.96 28.59
CDY30731 Canola plasma membrane 37.09 28.55
CDY21692 Canola plasma membrane 35.36 28.4
CDX84344 Canola plasma membrane 36.88 28.24
CDY36913 Canola cytosol, peroxisome, plasma membrane 37.53 28.13
CDX87266 Canola peroxisome 34.92 28.1
CDY45754 Canola plasma membrane 36.66 28.07
CDY51783 Canola cytosol, peroxisome, plasma membrane 36.66 28.03
CDY16763 Canola peroxisome 34.71 27.87
CDX96690 Canola plasma membrane 36.44 27.68
CDX83027 Canola cytosol, peroxisome, plasma membrane 35.79 27.41
CDY69433 Canola golgi, peroxisome, plastid 37.53 27.29
CDY21805 Canola cytosol, peroxisome, plasma membrane 36.44 27.05
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.49 26.86
CDY07377 Canola cytosol, peroxisome, plasma membrane 34.71 26.85
CDX97728 Canola plasma membrane 34.49 26.81
CDY04237 Canola cytosol, peroxisome, plasma membrane 34.49 26.72
CDY30141 Canola plasma membrane 34.27 26.64
CDY70561 Canola plasma membrane 30.8 26.1
CDY38766 Canola plasma membrane 31.02 25.95
CDY11648 Canola plasma membrane 31.02 25.95
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 32.54 25.3
CDY54537 Canola cytosol, peroxisome, plasma membrane 33.41 24.92
CDX99152 Canola plasma membrane 29.93 24.78
CDY12696 Canola plasma membrane 27.55 24.56
CDY18499 Canola plasma membrane 29.5 24.42
CDY69402 Canola plasma membrane 15.4 23.83
CDX99151 Canola plasma membrane 28.63 23.78
CDX81495 Canola plasma membrane 26.68 23.7
CDX86031 Canola plasma membrane 7.81 23.23
CDY20187 Canola plasma membrane 14.75 23.13
CDY67993 Canola plasma membrane 27.33 22.66
CDX86030 Canola plasma membrane 13.23 22.43
CDY48147 Canola plasma membrane 26.68 22.32
CDY69519 Canola plasma membrane 14.1 22.26
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 16.7 22.13
CDY69522 Canola plasma membrane 13.88 21.92
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.42 18.93
CDY65728 Canola cytosol 7.59 17.59
CDX69747 Canola plasma membrane 27.98 8.34
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078IN26UniProt:A0A078IN26EnsemblPlants:CDY52480ProteinID:CDY52480
ProteinID:CDY52480.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00007151001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF181SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EE6D4B:::::
Description
BnaC07g49410DBnaC07g49410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN26]
Coordinates
chrLK033095:-:34915..37433
Molecular Weight (calculated)
51032.9 Da
IEP (calculated)
9.800
GRAVY (calculated)
0.309
Length
461 amino acids
Sequence
(BLAST)
001: MGVMALTAAI PRLRPEACND PTNCSNPPTK WQLVVLFSSL GLLAIGAGAI RPCNIAFGAD QFDTGTKKGK AQLETFFNWW YFSFTVALVI ALTGVVYIQT
101: NVSWVIGFVI PTACLALSVT TFVIGQHTYI CQKPKGSVFA DMVKVIAAAS KKRKLKSGEG VSFYLGPSTD GSSTTLIQNR QRLGFFDKAA VITDPNELND
201: EGKTKNNWRL CSLQQVKNLK CVTAVLPVWV TGIACFMLTD QQNIYGILQA IQMDKTFGHN FNVPAGWMNL VSMITLAIWI SLYECVILPI ARQITGRKQR
301: LTMKQRIQIG IVMGIACMIV AGFLEKDRRA SALKNGSFVS PVSIVMLLPQ FVLAGLTEAF SAVALMEFLT VKMPEHMRAV AGAIFFLSSS VASYICTLLI
401: NVIDKVTREE GHSWLGDKDL NKNRLENYFF IIGGIQVVNL IYFRFFASRF VTKKDKDNRD F
Best Arabidopsis Sequence Match ( AT5G28470.2 )
(BLAST)
001: MDVESSSPSS HALIKKEKGG WRAIKYIIAN ESFEKLASMS LIGNLSVYLM TKYNLGGVFL VNVINIWFGS CNILTLAGAF VSDAYLGRFW TLLLGSIASF
101: IGMGIFALTA ALPSLRPDAC IDPSNCSNQP AKWQLGVLFS GLGLLAIGAG GVRPCNIAFG ADQFDTSTKK GKAHLETFFN WWYFSFTVAL VIALTGVVYI
201: QTNISWVIGF VIPTACLALS ITTFVIGQHT YICAKAEGSV FADIVKVVTA ACKKRKVKPG SDITFYIGPS NDGSPTTLVR DKHRLRFFDK ASIVTNPNEL
301: NEDGNAKYKW RLCSVQQVKN LKCVTAILPV WVTGIACFIL TDQQNIYGIL QAMQMDKTFG PHNFQVPAGW MNLVSMITLA IWISLYECVI IPIVKQITGR
401: KKRLTLKHRI EIGIVMGIIC MIVAGFQEKK RRASALKNGS FVSPVSIVML LPQFALAGLT EAFSAVALME FLTVRMPEHM RAVAGAIFFL SSSIASYICT
501: LLINVIDAVT RKEGKSWLGD KDLNKNRLEN YFFIIAGIQV ANLLYFRLFA SRYATENKKG H
Arabidopsis Description
Major facilitator superfamily protein [Source:TAIR;Acc:AT5G28470]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.