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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019521.1-P Field mustard plasma membrane 95.49 97.05
CDY69433 Canola golgi, peroxisome, plastid 98.55 96.53
CDY51783 Canola cytosol, peroxisome, plasma membrane 84.86 87.4
CDY36913 Canola cytosol, peroxisome, plasma membrane 86.31 87.15
CDX83027 Canola cytosol, peroxisome, plasma membrane 82.93 85.55
CDX68450 Canola cytosol, peroxisome, plasma membrane 83.25 84.06
AT3G47960.1 Thale cress plasma membrane 83.9 81.92
CDY45756 Canola plasma membrane 72.79 79.16
CDY45754 Canola plasma membrane 76.65 79.07
CDX84344 Canola plasma membrane 76.49 78.9
CDY30731 Canola plasma membrane 76.01 78.8
CDY00315 Canola plasma membrane 76.49 77.61
CDY16763 Canola peroxisome 70.37 76.13
CDX87266 Canola peroxisome 70.05 75.92
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 61.67 64.59
CDY21692 Canola plasma membrane 58.45 63.24
CDY26715 Canola plasma membrane 58.45 62.59
CDX83801 Canola cytosol, peroxisome, plasma membrane 59.26 62.27
CDY09846 Canola plasma membrane 42.83 62.0
CDX81902 Canola cytosol, peroxisome, plasma membrane 58.94 61.82
CDX96690 Canola plasma membrane 59.42 60.79
KRH03412 Soybean plasma membrane 53.95 57.17
KRH03408 Soybean cytosol, peroxisome, plasma membrane 54.43 57.09
KRH56968 Soybean plasma membrane 54.59 56.88
Solyc03g113420.2.1 Tomato plasma membrane 53.62 56.73
PGSC0003DMT400065196 Potato plasma membrane 53.95 56.68
KRH56970 Soybean cytosol, peroxisome, plasma membrane 54.11 56.28
KRH56969 Soybean plasma membrane 54.27 55.16
KRH03409 Soybean plasma membrane 54.11 54.9
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 45.25 50.18
Os12t0638300-01 Rice extracellular, plasma membrane 46.54 49.23
GSMUA_Achr4P22320_001 Banana plasma membrane 39.77 48.81
GSMUA_Achr5P15030_001 Banana cytosol 37.2 48.73
Os03t0687000-02 Rice plasma membrane 45.89 48.55
TraesCS4D01G026800.1 Wheat golgi, unclear 46.38 48.32
TraesCS4A01G283900.1 Wheat golgi, unclear 46.38 48.24
Zm00001d013529_P002 Maize plasma membrane 45.89 48.22
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 45.73 47.73
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 45.25 47.71
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 46.05 47.59
EER91066 Sorghum cytosol, peroxisome, plasma membrane 45.25 47.39
Zm00001d031213_P001 Maize plasma membrane 37.68 45.97
TraesCS2B01G057700.1 Wheat plasma membrane 43.8 45.41
TraesCS2D01G044200.1 Wheat plasma membrane 43.8 45.41
TraesCS2A01G045500.1 Wheat plasma membrane 43.64 45.24
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 42.67 45.07
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 43.16 44.37
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 43.64 44.14
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 43.32 44.03
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 43.64 43.99
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 43.0 43.99
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 43.32 43.95
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 42.67 43.8
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 43.48 43.69
TraesCS2D01G044000.1 Wheat plasma membrane 42.03 43.36
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 41.38 43.27
EES16414 Sorghum cytosol, peroxisome, plasma membrane 41.38 43.05
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 42.35 42.83
CDY56086 Canola cytosol, peroxisome, plasma membrane 40.58 42.64
CDY53067 Canola cytosol, peroxisome, plasma membrane 40.58 42.42
CDY40280 Canola plasma membrane 38.49 42.08
EER98133 Sorghum plasma membrane 43.96 41.94
CDY25813 Canola cytosol, peroxisome, plasma membrane 38.0 41.55
CDY23545 Canola cytosol, peroxisome, plasma membrane 40.58 41.52
CDY48389 Canola cytosol, peroxisome, plasma membrane 40.42 41.35
CDY28441 Canola cytosol, peroxisome, plasma membrane 37.68 41.2
CDY11647 Canola plastid 40.9 41.03
CDY38767 Canola plastid 40.9 40.84
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 43.16 39.07
CDY38766 Canola plasma membrane 33.33 37.57
CDY11648 Canola plasma membrane 33.01 37.21
CDY52480 Canola plasma membrane 27.05 36.44
CDX86198 Canola peroxisome 32.85 35.85
CDY20187 Canola plasma membrane 16.75 35.37
CDY05592 Canola plasma membrane 32.37 35.14
CDY52504 Canola plasma membrane 32.37 35.14
CDX86030 Canola plasma membrane 15.3 34.93
CDY38595 Canola cytosol, peroxisome, plasma membrane 32.53 34.12
CDX99152 Canola plasma membrane 30.6 34.11
CDY07377 Canola cytosol, peroxisome, plasma membrane 31.88 33.22
CDY69519 Canola plasma membrane 15.62 33.22
CDY69522 Canola plasma membrane 15.62 33.22
CDY04237 Canola cytosol, peroxisome, plasma membrane 31.72 33.11
CDY65728 Canola cytosol 10.47 32.66
CDY69402 Canola plasma membrane 15.62 32.55
CDY30141 Canola plasma membrane 30.92 32.38
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.21 32.36
CDY28371 Canola plasma membrane 25.28 32.3
CDX97728 Canola plasma membrane 30.76 32.21
CDY70561 Canola plasma membrane 28.18 32.17
CDY51257 Canola plastid 24.96 31.89
CDY12696 Canola plasma membrane 26.41 31.72
CDY48147 Canola plasma membrane 28.02 31.58
CDX81495 Canola plasma membrane 26.25 31.41
CDY18499 Canola plasma membrane 27.86 31.06
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.23 30.75
CDX99151 Canola plasma membrane 26.09 29.19
CDY67993 Canola plasma membrane 25.76 28.78
CDX86031 Canola plasma membrane 6.92 27.74
CDX96007 Canola cytosol, peroxisome, plasma membrane 27.21 24.42
CDX69747 Canola plasma membrane 26.41 10.61
CDY68532 Canola cytosol 0.16 0.19
Protein Annotations
MapMan:24.2.2.9GO:A0A078G5S2UniProt:A0A078G5S2EnsemblPlants:CDY21805ProteinID:CDY21805ProteinID:CDY21805.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00016351001InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0004EDB3D1SEG:seg:::
Description
BnaA06g20740DBnaA06g20740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5S2]
Coordinates
chrLK032124:-:406449..409085
Molecular Weight (calculated)
69055.2 Da
IEP (calculated)
8.889
GRAVY (calculated)
0.217
Length
621 amino acids
Sequence
(BLAST)
001: MKSRVIHSHR ERRDKHNYTQ IETMERKPFD VETTEDHKLY PSVDGGGSDS VDSFEDEQKK LVYRGWKVMP FIIGNETFEK IGIIGTLSNL LVYLTSVFNL
101: KSVTAATIIN AFSGTINFGT FLAAFLCDTY FGRYKTLSVA VIACFLGSLV ILLTAAVPGL HPIPCGTQSS CQGPSEGQIA FLLMGLALLV VGAGGIRPCN
201: LAFGADQFNP KSESGKKGIN SFFNWYFFTF TFAQIISLTL VVYIQSNVSW TIGLSIPVGL MFLACVIFFA GHKLYVKVKA SGSPLAGIGH VIAAAIKKRG
301: LKPVKQPWID LYNHIPHNYA NSTLKYTDQL RFLDKAAIMT AEDKLNSDGT ASDPWKLCTM QKVEEVKCIL RVIPIWFACA IYYLAISMQM TYPVFQALQS
401: DRRLGSGGFK IPAATYVVFL MSGMTVFIII YDRVLVPSLK RVTGLDTGIT LLQRIGAGIF FAVRTFALTR PTLGSEPRTG EISSMSGMWL IPQLVLAGVA
501: EAFAAIGQME FYYKQFPENM KSFAGSIFYV GGGVSSYLAS FLISTVHRTT EHSPTGNWLA EDLNKAKLDY FYFMLTGLMF VNFLYFLLMA RWYRYKGTHD
601: EVSYVVDTVD EETKQQDKNS V
Best Arabidopsis Sequence Match ( AT3G47960.1 )
(BLAST)
001: MKSRVILNHR DRRDKNHNNN NTNHYTQVDT MERKPLEVEP STTTTNTDVV DSFEEEQRKI VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTSVFNLK
101: SYTAATIINA FSGTINFGTF IAAFLCDTYF GRYKTLSVAV IACFLGSFVI LLTAAIPSLH PVACGNKISC EGPSVGQILF LLMGLGFLVV GAGGIRPCNL
201: AFGADQFNPK SESGKKGINS FFNWYFFTFT FAQIISLTAV VYIQSNVSWT IGLIIPVALM FLACVIFFAG DRLYVKVKAS GSPLAGIARV IAAAIKKRGL
301: KPVKQPWVNL YNHIPSNYAN TTLKYTDQFR FLDKAAIMTP EEKLNSDGTA SDPWKLCTLQ QVEEVKCIVR VIPIWFASTI YYLAITIQMT YPVFQALQSD
401: RRLGSGGFRI PAATYVVFLM TGMTVFIIFY DRVLVPSLRR VTGLETGISL LQRIGAGFTF AIMSLLVSGF IEERRRNFAL TKPTLGMAPR TGEISSMSAL
501: WLIPQLTLAG IAEAFAAIGQ MEFYYKQFPE NMKSFAGSIF YVGAGVSSYL ASFLISTVHR TTAHSPSGNW LAEDLNKAKL DYFYFMLTGL MVVNMAYFLL
601: MARWYRYKGG NDEDITEIET NEEETKQQQL QDKNSV
Arabidopsis Description
NPF2.10GTR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6P7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.