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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016259.1-P Field mustard plastid 98.71 98.23
CDY38767 Canola plastid 98.55 98.07
CDY56086 Canola cytosol, peroxisome, plasma membrane 89.5 93.74
CDY53067 Canola cytosol, peroxisome, plasma membrane 89.5 93.27
CDY48389 Canola cytosol, peroxisome, plasma membrane 86.27 87.97
CDY23545 Canola cytosol, peroxisome, plasma membrane 85.62 87.31
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 84.98 84.84
CDY40280 Canola plasma membrane 63.97 69.72
CDY25813 Canola cytosol, peroxisome, plasma membrane 63.81 69.54
CDY28441 Canola cytosol, peroxisome, plasma membrane 63.65 69.37
KRH74756 Soybean plastid 59.94 59.84
VIT_01s0026g01490.t01 Wine grape plastid 58.64 58.64
KRH69380 Soybean plastid 59.13 58.19
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 57.84 57.56
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 54.28 55.45
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 53.8 54.86
GSMUA_Achr4P17590_001 Banana plasma membrane 36.35 50.34
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 37.8 48.15
CDY38766 Canola plasma membrane 42.81 48.09
CDY11648 Canola plasma membrane 42.49 47.73
Os01t0913300-01 Rice plasma membrane 46.04 47.5
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 42.81 46.57
HORVU3Hr1G092870.1 Barley plasma membrane 44.26 45.21
CDY45756 Canola plasma membrane 41.52 45.01
TraesCS3D01G414400.1 Wheat plasma membrane 43.62 44.78
TraesCS3B01G454100.1 Wheat plasma membrane 43.62 44.63
TraesCS3B01G454000.1 Wheat plasma membrane 43.78 44.5
TraesCS3A01G418700.1 Wheat plasma membrane 43.62 44.48
TraesCS3D01G414300.1 Wheat plasma membrane 43.62 44.48
CDY09846 Canola plasma membrane 30.69 44.29
CDY00315 Canola plasma membrane 43.3 43.79
CDY30731 Canola plasma membrane 42.16 43.57
CDX84344 Canola plasma membrane 42.33 43.52
CDY26715 Canola plasma membrane 40.71 43.45
TraesCS3A01G418800.1 Wheat plasma membrane 43.62 43.41
CDX68450 Canola cytosol, peroxisome, plasma membrane 42.81 43.09
CDY51783 Canola cytosol, peroxisome, plasma membrane 41.68 42.79
CDX81902 Canola cytosol, peroxisome, plasma membrane 40.87 42.74
CDY45754 Canola plasma membrane 41.52 42.69
CDY21692 Canola plasma membrane 39.42 42.51
CDY36913 Canola cytosol, peroxisome, plasma membrane 42.16 42.44
CDX83027 Canola cytosol, peroxisome, plasma membrane 41.2 42.36
CDX83801 Canola cytosol, peroxisome, plasma membrane 40.39 42.3
CDY69433 Canola golgi, peroxisome, plastid 42.0 41.01
CDY21805 Canola cytosol, peroxisome, plasma membrane 41.03 40.9
CDX96690 Canola plasma membrane 39.9 40.69
CDY16763 Canola peroxisome 37.64 40.59
CDX87266 Canola peroxisome 37.48 40.49
CDY69519 Canola plasma membrane 18.58 39.38
CDY69522 Canola plasma membrane 18.58 39.38
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.64 39.36
CDX86198 Canola peroxisome 36.03 39.19
CDY05592 Canola plasma membrane 36.19 39.16
CDY52504 Canola plasma membrane 36.19 39.16
CDY52480 Canola plasma membrane 29.08 39.05
CDY20187 Canola plasma membrane 18.42 38.78
KXG37624 Sorghum plasma membrane 37.32 38.18
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 36.35 37.94
CDY07377 Canola cytosol, peroxisome, plasma membrane 36.03 37.42
CDY04237 Canola cytosol, peroxisome, plasma membrane 35.86 37.31
CDY70561 Canola plasma membrane 32.63 37.13
CDY28371 Canola plasma membrane 29.08 37.04
CDY30141 Canola plasma membrane 35.38 36.93
CDX97728 Canola plasma membrane 35.22 36.76
Os04t0660900-01 Rice plasma membrane, plastid 37.32 36.61
EES13016 Sorghum cytosol, nucleus, plasma membrane 37.64 36.46
CDY51257 Canola plastid 28.59 36.42
CDY54537 Canola cytosol, peroxisome, plasma membrane 36.19 36.25
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 20.36 36.21
CDY65728 Canola cytosol 11.47 35.68
CDX99152 Canola plasma membrane 31.5 35.01
CDY69402 Canola plasma membrane 16.64 34.56
Zm00001d001976_P001 Maize plastid 37.16 34.33
CDY12696 Canola plasma membrane 28.27 33.85
CDY18499 Canola plasma membrane 30.37 33.75
CDX81495 Canola plasma membrane 28.27 33.72
CDY67993 Canola plasma membrane 28.76 32.01
CDX86031 Canola plasma membrane 7.92 31.61
CDY48147 Canola plasma membrane 28.11 31.58
CDX86030 Canola plasma membrane 13.73 31.25
CDX99151 Canola plasma membrane 27.79 30.99
CDX96007 Canola cytosol, peroxisome, plasma membrane 31.18 27.89
CDX69747 Canola plasma membrane 29.4 11.77
CDY68532 Canola cytosol 0.32 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078FF84UniProt:A0A078FF84EnsemblPlants:CDY11647ProteinID:CDY11647ProteinID:CDY11647.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00049784001InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE6D95
SEG:seg:::::
Description
BnaC06g30920DBnaC06g30920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF84]
Coordinates
chrLK032012:-:738397..743179
Molecular Weight (calculated)
68488.6 Da
IEP (calculated)
9.273
GRAVY (calculated)
0.190
Length
619 amino acids
Sequence
(BLAST)
001: MGLKDTKDGT SLPRSSPSFS RATRPPPEMH AVNSYNPKST SDSLSDGEKV EKKPGGWRAV TFILGNETLE RLGTIGLLSN FMVYLTRMFH LEQVDASNVI
101: NIWSGFTNLT PLVGAFISDA YVGRFKTIAF ASFATLLGLV TLTLTASLPQ LHPATCNSKD PVSCGGPNKL QFGILLLGLG FLSIGSGGIR PCSIPFGVDQ
201: FDQRTEEGIK GVASFFNWYY MTFTIVLLIT QTVVVYIQDQ VSWVIGFSVP TGLMACAVVM FFAGMKLYVY VKPEGSIFSG IAQVVVAARK KRKMKLPEED
301: DGTVTYYDPP VKESVLSKLH HSNQFRFLDK AAVIIEGDLT PEGVPANKWR LCSIQEVEEV KCLIRIVPVW SAGIISLAAM SQQGTFTVSQ ALKMDRHMGR
401: NFEIPAGSLS VISLLTIGVF LPLYDRVLVP FLRRITGHKS GITLLQRIGT GIVFAILSMI VAGLVERKRR IRSINAGDPT GMTPMSVFWL SPQLVLMGLC
501: EAFNIIGQIE FFNSQFPEHM RSIANSLFSL SFAGSNYLSS LIVTTVHRFS GGHDRLDWLN KNLNAGKLDY FYYLIAVLGV FNLVYFWYCA RGYRYKVGLQ
601: MGDFEENKSF SDVEMSSKK
Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.