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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025695.1-P Field mustard plasma membrane 99.66 99.66
CDX83801 Canola cytosol, peroxisome, plasma membrane 91.9 90.19
CDX81902 Canola cytosol, peroxisome, plasma membrane 91.38 89.53
CDY21692 Canola plasma membrane 87.76 88.68
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 89.31 88.25
CDY09846 Canola plasma membrane 64.31 86.95
CDX96690 Canola plasma membrane 89.31 85.34
CDY45756 Canola plasma membrane 62.24 63.22
CDX84344 Canola plasma membrane 63.97 61.63
CDY45754 Canola plasma membrane 63.79 61.46
CDY00315 Canola plasma membrane 64.83 61.44
CDY30731 Canola plasma membrane 63.1 61.1
CDY16763 Canola peroxisome 59.83 60.45
CDX87266 Canola peroxisome 59.66 60.38
CDY21805 Canola cytosol, peroxisome, plasma membrane 62.59 58.45
CDY36913 Canola cytosol, peroxisome, plasma membrane 61.72 58.21
CDX68450 Canola cytosol, peroxisome, plasma membrane 61.38 57.89
CDY51783 Canola cytosol, peroxisome, plasma membrane 60.17 57.88
CDY69433 Canola golgi, peroxisome, plastid 63.1 57.73
CDX83027 Canola cytosol, peroxisome, plasma membrane 59.66 57.48
KRH03408 Soybean cytosol, peroxisome, plasma membrane 58.1 56.93
KRH56970 Soybean cytosol, peroxisome, plasma membrane 58.1 56.45
KRH03409 Soybean plasma membrane 58.45 55.39
KRH56969 Soybean plasma membrane 58.28 55.32
KRH56968 Soybean plasma membrane 56.72 55.2
Solyc03g113420.2.1 Tomato plasma membrane 55.34 54.68
PGSC0003DMT400065196 Potato plasma membrane 55.69 54.65
KRH03412 Soybean plasma membrane 55.0 54.44
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 52.93 51.77
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 49.14 50.89
GSMUA_Achr4P22320_001 Banana plasma membrane 43.79 50.2
Zm00001d013529_P002 Maize plasma membrane 50.0 49.07
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 49.66 48.9
EER91066 Sorghum cytosol, peroxisome, plasma membrane 49.66 48.57
Os03t0687000-02 Rice plasma membrane 49.14 48.55
GSMUA_Achr5P15030_001 Banana cytosol 39.48 48.31
TraesCS4D01G026800.1 Wheat golgi, unclear 49.48 48.15
TraesCS4A01G283900.1 Wheat golgi, unclear 49.48 48.07
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 49.31 48.07
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 49.48 47.75
Os12t0638300-01 Rice extracellular, plasma membrane 47.59 47.02
Zm00001d031213_P001 Maize plasma membrane 40.86 46.56
TraesCS2B01G057700.1 Wheat plasma membrane 47.93 46.41
TraesCS2A01G045500.1 Wheat plasma membrane 47.76 46.24
TraesCS2D01G044200.1 Wheat plasma membrane 47.76 46.24
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 47.41 45.53
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 47.41 45.3
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 47.41 45.01
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 46.03 44.95
TraesCS2D01G044000.1 Wheat plasma membrane 46.55 44.85
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 46.72 44.79
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 47.24 44.77
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.17 44.56
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 47.07 44.46
EES16414 Sorghum cytosol, peroxisome, plasma membrane 45.69 44.39
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 46.38 43.81
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 46.21 43.51
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 45.69 42.88
CDY23545 Canola cytosol, peroxisome, plasma membrane 44.31 42.34
CDY56086 Canola cytosol, peroxisome, plasma membrane 43.1 42.3
CDY53067 Canola cytosol, peroxisome, plasma membrane 42.76 41.75
CDY40280 Canola plasma membrane 40.86 41.73
CDY28441 Canola cytosol, peroxisome, plasma membrane 40.69 41.55
CDY25813 Canola cytosol, peroxisome, plasma membrane 40.52 41.37
CDY48389 Canola cytosol, peroxisome, plasma membrane 43.28 41.35
EER98133 Sorghum plasma membrane 46.21 41.17
CDY11647 Canola plastid 43.45 40.71
CDY38767 Canola plastid 43.45 40.51
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.55 39.36
CDY38766 Canola plasma membrane 36.21 38.11
CDY11648 Canola plasma membrane 36.03 37.93
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.93 37.16
CDY52480 Canola plasma membrane 29.48 37.09
CDY69402 Canola plasma membrane 18.97 36.91
CDY04237 Canola cytosol, peroxisome, plasma membrane 37.76 36.81
CDY07377 Canola cytosol, peroxisome, plasma membrane 37.76 36.74
CDX86198 Canola peroxisome 35.34 36.03
CDY54537 Canola cytosol, peroxisome, plasma membrane 37.76 35.44
CDY20187 Canola plasma membrane 17.93 35.37
CDY65728 Canola cytosol 12.07 35.18
CDY05592 Canola plasma membrane 34.31 34.79
CDY52504 Canola plasma membrane 34.31 34.79
CDY48147 Canola plasma membrane 32.59 34.3
CDX99152 Canola plasma membrane 32.76 34.11
CDY12696 Canola plasma membrane 30.34 34.04
CDX81495 Canola plasma membrane 30.34 33.91
CDY69519 Canola plasma membrane 17.07 33.9
CDY69522 Canola plasma membrane 17.07 33.9
CDY30141 Canola plasma membrane 34.66 33.9
CDX97728 Canola plasma membrane 34.48 33.73
CDX86030 Canola plasma membrane 15.52 33.09
CDY70561 Canola plasma membrane 31.03 33.09
CDY28371 Canola plasma membrane 27.41 32.72
CDY18499 Canola plasma membrane 31.38 32.67
CDY51257 Canola plastid 27.07 32.3
CDX99151 Canola plasma membrane 29.66 30.99
CDX86031 Canola plasma membrane 8.28 30.97
CDY67993 Canola plasma membrane 27.93 29.14
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.07 28.45
CDX96007 Canola cytosol, peroxisome, plasma membrane 32.07 26.88
CDX69747 Canola plasma membrane 28.79 10.8
CDY68532 Canola cytosol 0.34 0.37
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078GJK3UniProt:A0A078GJK3EnsemblPlants:CDY26715ProteinID:CDY26715
ProteinID:CDY26715.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00035618001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF1BC3SEG:seg::
Description
BnaA06g13070DBnaA06g13070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJK3]
Coordinates
chrLK032193:-:287966..290140
Molecular Weight (calculated)
64643.3 Da
IEP (calculated)
9.211
GRAVY (calculated)
0.273
Length
580 amino acids
Sequence
(BLAST)
001: MEAEKTEKKI TEEEDDESKI IYRGWKVMPF IIGNETFEKL GIVGSSSNLV IYLTTVFNMK SITAATVVNI YSGTSNFGTI VAAFLCDSYF GRYKTLSVAM
101: IACFLGSVAM DLTAVINQLH PAKCAKEIGS VCKGPSIVQI MFLAGAMVLL VIGAGGIRPC NLPFGADQFD PKTKEGKRGI ESFFNWYFFT FTFAQMVSLT
201: VIVYVQSNVS WSIGLAIPAI LMFLGCIIFF SGSKLYVKVK PSGSPIHSIT RVIVVAIKKR KLNLVGSMYN HTAKDFRNSK LSHTEQFRFL DKAAIQTPDD
301: KLNIDGSPAD PWKLCSMQQV EEVKCVIRVL PVWLSAALFY VAYIQQTTYT IFQSLQSDRH LGSKSFQIPP ATYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDSGITQLQ RVGAGMFLCI TSMMVSATVE QHRRTVALTR PPLGFALRKG AISSMSGMWL IPQLVLMGVG DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLSS FLLSAVHNIT EGSLGGNWLP EDLNKGRLEY FYYFVAGMMT INFAYFLLVS HWYRYKDVVA KDNDIDKVSV
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.