Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83801 | Canola | cytosol, peroxisome, plasma membrane | 91.65 | 91.03 |
| CDX81902 | Canola | cytosol, peroxisome, plasma membrane | 91.14 | 90.37 |
| CDY21692 | Canola | plasma membrane | 88.25 | 90.24 |
| Bra031054.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 90.46 | 89.7 |
| CDY26715 | Canola | plasma membrane | 88.25 | 89.31 |
| Bra025695.1-P | Field mustard | plasma membrane | 88.08 | 89.14 |
| CDY09846 | Canola | plasma membrane | 64.91 | 88.81 |
| CDX96690 | Canola | plasma membrane | 89.27 | 86.33 |
| AT5G62680.1 | Thale cress | golgi, peroxisome, vacuole | 64.4 | 61.36 |
| AT3G47960.1 | Thale cress | plasma membrane | 62.35 | 57.55 |
| KRH03408 | Soybean | cytosol, peroxisome, plasma membrane | 57.58 | 57.09 |
| KRH56970 | Soybean | cytosol, peroxisome, plasma membrane | 57.75 | 56.78 |
| KRH56968 | Soybean | plasma membrane | 56.22 | 55.37 |
| KRH03409 | Soybean | plasma membrane | 57.41 | 55.07 |
| KRH56969 | Soybean | plasma membrane | 57.24 | 54.99 |
| Solyc03g113420.2.1 | Tomato | plasma membrane | 54.86 | 54.86 |
| PGSC0003DMT400065196 | Potato | plasma membrane | 55.2 | 54.82 |
| KRH03412 | Soybean | plasma membrane | 54.68 | 54.78 |
| Bra016534.1-P | Field mustard | plastid | 90.63 | 51.55 |
| GSMUA_Achr5P15010_001 | Banana | cytosol, peroxisome, plasma membrane | 48.38 | 50.71 |
| Zm00001d013529_P002 | Maize | plasma membrane | 49.06 | 48.73 |
| GSMUA_Achr4P22320_001 | Banana | plasma membrane | 41.91 | 48.62 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 48.89 | 48.4 |
| Os03t0687000-02 | Rice | plasma membrane | 48.38 | 48.38 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 48.21 | 48.05 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 47.53 | 47.53 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 48.21 | 47.48 |
| Zm00001d031213_P001 | Maize | plasma membrane | 41.06 | 47.35 |
| GSMUA_Achr5P15030_001 | Banana | cytosol | 38.16 | 47.26 |
| HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 48.38 | 47.25 |
| TraesCS4A01G283900.1 | Wheat | golgi, unclear | 48.04 | 47.24 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.87 | 47.23 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 47.36 | 46.41 |
| TraesCS2A01G045500.1 | Wheat | plasma membrane | 47.19 | 46.24 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 47.02 | 46.08 |
| HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 47.19 | 45.86 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 46.85 | 45.3 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 45.14 | 45.07 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 45.83 | 45.06 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 45.49 | 44.95 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.68 | 44.84 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 45.83 | 44.68 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.0 | 44.63 |
| TraesCS5A01G004400.1 | Wheat | cytosol, nucleus, plasma membrane | 46.51 | 44.61 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.49 | 43.49 |
| TraesCS5A01G037900.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.49 | 43.34 |
| HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 45.32 | 43.32 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 44.97 | 42.72 |
| EER98133 | Sorghum | plasma membrane | 46.34 | 41.78 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 43.27 | 40.97 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 39.52 | 40.28 |
| HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 46.51 | 39.8 |
| AT1G69860.1 | Thale cress | plasma membrane | 35.95 | 38.02 |
| AT5G28470.2 | Thale cress | plasma membrane | 35.95 | 37.61 |
| AT1G68570.1 | Thale cress | cytosol, peroxisome, plasma membrane | 37.31 | 36.74 |
| AT3G45660.2 | Thale cress | plasma membrane | 34.92 | 35.47 |
| AT3G45680.1 | Thale cress | plasma membrane | 32.88 | 34.59 |
| AT3G45650.2 | Thale cress | plasma membrane | 34.24 | 34.42 |
| AT3G16180.1 | Thale cress | plasma membrane | 34.24 | 34.01 |
| AT3G45690.1 | Thale cress | plasma membrane | 29.47 | 33.53 |
| AT3G45720.1 | Thale cress | plasma membrane | 31.18 | 32.97 |
| AT3G45700.1 | Thale cress | plasma membrane | 30.66 | 32.85 |
| AT1G52190.1 | Thale cress | cytosol, peroxisome, plasma membrane | 33.9 | 32.78 |
| AT5G11570.1 | Thale cress | plasma membrane | 26.41 | 32.22 |
| AT3G45710.1 | Thale cress | plasma membrane | 29.81 | 31.25 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | EntrezGene:838469 | UniProt:A0A178WEW3 | ProteinID:AAF27093.1 | ProteinID:AEE29776.1 |
| ArrayExpress:AT1G18880 | EnsemblPlantsGene:AT1G18880 | RefSeq:AT1G18880 | TAIR:AT1G18880 | RefSeq:AT1G18880-TAIR-G | EnsemblPlants:AT1G18880.1 |
| TAIR:AT1G18880.1 | EMBL:AY070054 | EMBL:AY117308 | Unigene:At.267 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010233 |
| GO:GO:0015112 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | GO:GO:0090408 |
| InterPro:IPR020846 | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_173322.1 | ProteinID:OAP16664.1 | PFAM:PF00854 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000071 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003011 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF59 | UniProt:Q9M9V7 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI00000A9FB3 | SEG:seg | : | : |
Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
Coordinates
chr1:+:6520721..6523368
Molecular Weight (calculated)
65178.1 Da
IEP (calculated)
9.197
GRAVY (calculated)
0.276
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.