Factsheet for Bra016534.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96690	Canola	plasma membrane	56.4	95.88
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.23	91.05
Bra025695.1-P	Field mustard	plasma membrane	51.07	90.86
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	51.55	90.63
Bra035886.1-P	Field mustard	plasma membrane	31.49	65.39
Bra010111.1-P	Field mustard	plasma membrane	37.02	62.42
Bra029248.1-P	Field mustard	plasma membrane	36.92	62.25
Bra035885.1-P	Field mustard	peroxisome	34.01	62.23
Bra019521.1-P	Field mustard	plasma membrane	36.43	61.54
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.47	59.51
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.37	59.35
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	33.24	57.94
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	33.24	57.45
KRH03409	Soybean	plasma membrane	33.14	55.88
Solyc03g113420.2.1	Tomato	plasma membrane	31.78	55.88
KRH56968	Soybean	plasma membrane	32.27	55.87
PGSC0003DMT400065196	Potato	plasma membrane	31.98	55.84
KRH56969	Soybean	plasma membrane	33.04	55.81
KRH03412	Soybean	plasma membrane	31.1	54.78
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	27.13	50.0
GSMUA_Achr4P22320_001	Banana	plasma membrane	24.42	49.8
Os12t0638300-01	Rice	extracellular, plasma membrane	27.52	48.38
Os03t0687000-02	Rice	plasma membrane	27.52	48.38
Zm00001d013529_P002	Maize	plasma membrane	27.52	48.05
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	27.42	48.05
EER91066	Sorghum	cytosol, peroxisome, plasma membrane	27.52	47.89
Zm00001d031213_P001	Maize	plasma membrane	23.55	47.74
GSMUA_Achr5P15030_001	Banana	cytosol	21.9	47.68
TraesCS4D01G026800.1	Wheat	golgi, unclear	27.52	47.65
TraesCS4A01G283900.1	Wheat	golgi, unclear	27.52	47.57
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	27.42	47.56
HORVU4Hr1G004460.1	Barley	cytosol, peroxisome, plasma membrane	27.52	47.25
TraesCS2B01G057700.1	Wheat	plasma membrane	26.74	46.08
TraesCS2A01G045500.1	Wheat	plasma membrane	26.65	45.91
TraesCS2D01G044200.1	Wheat	plasma membrane	26.55	45.74
HORVU5Hr1G000800.3	Barley	cytosol, peroxisome, plasma membrane	26.74	45.7
EES16414	Sorghum	cytosol, peroxisome, plasma membrane	26.36	45.56
KXG24141	Sorghum	cytosol, peroxisome, plasma membrane	26.16	45.45
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	25.78	45.24
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	26.55	45.14
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	26.65	45.01
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	26.45	44.61
HORVU7Hr1G018540.1	Barley	cytosol, nucleus, plasma membrane	26.45	44.46
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	25.87	44.13
TraesCS2D01G044000.1	Wheat	plasma membrane	25.68	44.02
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	25.78	43.32
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	25.78	43.18
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	25.58	42.72
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.03	41.96
EER98133	Sorghum	plasma membrane	26.16	41.47
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.19	40.32
Bra016259.1-P	Field mustard	plastid	24.22	40.19
HORVU2Hr1G006820.2	Barley	golgi, plasma membrane	26.55	39.94
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	13.28	39.83
Bra016260.1-P	Field mustard	plasma membrane	20.64	38.66
Bra038366.1-P	Field mustard	plasma membrane	17.15	38.15
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.83	36.32
Bra009996.1-P	Field mustard	peroxisome	19.77	35.85
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.64	35.74
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	20.83	35.6
Bra020609.1-P	Field mustard	plasma membrane	19.48	35.14
Bra033836.1-P	Field mustard	plasma membrane	17.64	34.87
Bra033955.1-P	Field mustard	plasma membrane	18.12	34.06
Bra027185.1-P	Field mustard	plasma membrane	19.38	33.73
Bra021295.1-P	Field mustard	plasma membrane	17.93	33.21
Bra018952.1-P	Field mustard	plasma membrane	19.19	32.67
Bra033884.1-P	Field mustard	plasma membrane	7.07	29.32
Bra021168.1-P	Field mustard	plasma membrane	18.99	22.5
Bra038280.1-P	Field mustard	plasma membrane	17.93	16.56
Bra008953.1-P	Field mustard	plasma membrane	16.57	11.06

Protein Annotations

MapMan:11.8.1.1	MapMan:24.2.2.9	Gene3D:3.60.120.10	MapMan:7.13.1	InterPro:ADC_synthase	EnsemblPlantsGene:Bra016534
EnsemblPlants:Bra016534.1	EnsemblPlants:Bra016534.1-P	InterPro:Chorismate_C	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR005801	InterPro:IPR020846	UniProt:M4DJ56
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00425	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654
PANTHER:PTHR11654:SF59	SUPFAM:SSF103473	SUPFAM:SSF56322	TMHMM:TMhelix	UniParc:UPI0002546F34	SEG:seg

Description

AT1G18880 (E=2e-285) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA08:-:18910878..18918361

Molecular Weight (calculated)

113849.0 Da

IEP (calculated)

8.057

GRAVY (calculated)

0.091

Length

1032 amino acids

Sequence
(BLAST)

0001: MNGCEASHKA PLGTVETRSL STVTSLAAAT EGLISAVSNL KSEPPPFSSG IVRLQVPVDQ QIGALDWLHA QNDALPRSFF SRRSDSGRPE LLQDLASENM
0101: NGICDANPVS VAGLGSAVFF RDHDPFSHDH WRSIRRFLSP NSPLIRAYGG LRFDPNGKAG VEWEQFGSFY FTVPQVEFVE FEGNSMLAAT FAWEDELSWT
0201: LQNAIEALQK TLLEVSSVIV RLRRESLGVS VVSKNHVPSK GDYYPSVNSA LEIIKEKYSP LSKPERLFYR KHLGVWSEAL AATRPRGDSE VSDLEIERDL
0301: LTRSIVLICA VNIYGMQAIC DRVIVKPQKT VRKLARIQHL YSQLAGQLRR EDDEFDILNA LHPTPAVCGC PVDEARLLIK QIESFDRGMY AGPVGFFGGG
0401: ESEFSVGIRS ALVQKGLGAL VYAGTGIVSG SDPSSEWNEL ELKISQTQEN TIGGEDDESK IIYRGWKVMP FIIGNETFEK LGIVGSSSNL VIYLTTVFNM
0501: KSITAATVVN IYGGTSNFGT IVAAFLCDSY FGRYKTLSFA MLACFLGSVA MDLTAVINQL HPDKCAKEIG SVCKGPSIGQ IVFLAGAMVL LVIGAGGIRP
0601: CNLPFGADQF DPKTKEGKRG IESFFNWYFF TFTFAQMVSL TLIVYVQSNV SWSIGLAIPA ILMLLGCIIF FAGSKLYVKV KASGSPIHSI TRVIVVAIKK
0701: RRLKLVGSSS DGLYNYIAKD FKNSKLSHTK QFRCLDKAAI QTPDDKLNID GSPANPWNLC SVQQVEEVKC VIRVLPVWLS AALFYLAYIQ QTTYTIFQSL
0801: QSDRRLGSGS FQIPAATYTV FLMLGMTIFI PIYDRVLVPF LRKYTGRDGG ITQLQRVGAG LFLCIASMMV SAAVEQHRRN VALTRPPLGF APRKGAISSM
0901: SGMWLIPQLV LMGIADALAG VGQMEFYYKQ FPENMRSFAG SLYYCGIGLA SYLSSFLLSA VHDVTEGSSG GNWLPEDLNK GKLEYFYYFV AGMMTLNFAY
1001: FLLVSHWYRY KDVVVKDKDM DKSCNEFDKV SV

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.