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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • plasma membrane 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48389 Canola cytosol, peroxisome, plasma membrane 95.64 54.2
CDY23545 Canola cytosol, peroxisome, plasma membrane 94.48 53.54
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 80.23 46.7
Bra016259.1-P Field mustard plastid 83.43 46.14
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 78.49 43.55
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 60.76 36.8
GSMUA_Achr4P17590_001 Banana plasma membrane 44.77 34.45
KRH74756 Soybean plastid 54.94 30.48
VIT_01s0026g01490.t01 Wine grape plastid 54.07 30.05
KRH69380 Soybean plastid 54.65 29.89
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 52.03 28.78
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 49.13 27.89
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 48.55 27.51
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 44.77 27.07
Bra035886.1-P Field mustard plasma membrane 38.08 26.36
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 36.92 26.13
Bra016260.1-P Field mustard plasma membrane 41.28 25.77
Os01t0913300-01 Rice plasma membrane 43.02 24.67
Bra035885.1-P Field mustard peroxisome 39.53 24.11
Bra025695.1-P Field mustard plasma membrane 40.12 23.79
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 42.15 23.58
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 41.86 23.41
Bra010111.1-P Field mustard plasma membrane 41.57 23.37
Bra029248.1-P Field mustard plasma membrane 41.57 23.37
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 40.12 23.31
Bra019521.1-P Field mustard plasma membrane 40.99 23.08
Bra009996.1-P Field mustard peroxisome 38.08 23.02
Bra020609.1-P Field mustard plasma membrane 38.08 22.9
HORVU3Hr1G092870.1 Barley plasma membrane 39.83 22.61
TraesCS3B01G454100.1 Wheat plasma membrane 39.24 22.31
TraesCS3A01G418700.1 Wheat plasma membrane 39.24 22.24
TraesCS3D01G414300.1 Wheat plasma membrane 39.24 22.24
TraesCS3D01G414400.1 Wheat plasma membrane 38.95 22.22
TraesCS3B01G454000.1 Wheat plasma membrane 38.95 22.0
TraesCS3A01G418800.1 Wheat plasma membrane 38.66 21.38
Bra027185.1-P Field mustard plasma membrane 35.17 20.4
Bra018952.1-P Field mustard plasma membrane 34.59 19.64
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 33.14 19.26
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 32.85 18.96
KXG37624 Sorghum plasma membrane 33.14 18.84
EES13016 Sorghum cytosol, nucleus, plasma membrane 33.72 18.15
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 31.69 18.05
Os04t0660900-01 Rice plasma membrane, plastid 32.85 17.91
Bra033955.1-P Field mustard plasma membrane 28.2 17.67
Zm00001d001976_P001 Maize plastid 33.72 17.31
Bra021295.1-P Field mustard plasma membrane 27.62 17.06
Bra033836.1-P Field mustard plasma membrane 23.55 15.52
Bra038366.1-P Field mustard plasma membrane 18.9 14.01
Bra021168.1-P Field mustard plasma membrane 35.17 13.89
Bra016534.1-P Field mustard plastid 39.83 13.28
Bra038280.1-P Field mustard plasma membrane 25.87 7.97
Bra008953.1-P Field mustard plasma membrane 26.16 5.82
Bra033884.1-P Field mustard plasma membrane 0.29 0.4
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EnsemblPlantsGene:Bra003979EnsemblPlants:Bra003979.1EnsemblPlants:Bra003979.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4CIE6InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0002541968SEG:seg::::
Description
AT1G69870 (E=1e-132) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA07:-:16080219..16087231
Molecular Weight (calculated)
37857.0 Da
IEP (calculated)
7.445
GRAVY (calculated)
0.288
Length
344 amino acids
Sequence
(BLAST)
001: MVLMDGRDGS SPPQPKMDAV DSYNQESPSD SFSDAEKVEK KRGGWRAVTF ILGNETLERL GTIGLLSNFM VYLTRVFHLE QVNAANVINI WFGFTNLTPL
101: VGAFISDAYV GRFKTIAFAS FATLLGLVTL TLTASLPQLH PATCISKDPV SCSGPNKLQF GTLFLGLVFL SIGTGGIRPC SIPFGADQFD QRTEEGVKGV
201: ASFFNWYYLT FTVVLLITQT VVVYIQDQVS WIIGFSIPTG LMACALVIFF AGMRLYIYVK PEGSIFSSIA QVIVAARNKR KMKLSAEDDG TVTYYDPPVK
301: DSVLHKLHRS NQFRFLDKAA VIKEGGFAMV ELAETVKEVI ISFV
Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.