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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 2
  • vacuole 2
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
EpiLoc:extracellular
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26715 Canola plasma membrane 99.66 99.66
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 90.69 88.85
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 89.14 88.08
Bra035886.1-P Field mustard plasma membrane 54.48 63.58
Bra029248.1-P Field mustard plasma membrane 64.66 61.27
Bra010111.1-P Field mustard plasma membrane 64.66 61.27
Bra035885.1-P Field mustard peroxisome 59.14 60.82
Bra019521.1-P Field mustard plasma membrane 63.45 60.23
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 61.72 58.21
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 61.03 57.56
KRH03408 Soybean cytosol, peroxisome, plasma membrane 58.1 56.93
KRH56970 Soybean cytosol, peroxisome, plasma membrane 58.1 56.45
KRH03409 Soybean plasma membrane 58.45 55.39
KRH56969 Soybean plasma membrane 58.28 55.32
KRH56968 Soybean plasma membrane 56.72 55.2
Solyc03g113420.2.1 Tomato plasma membrane 55.34 54.68
PGSC0003DMT400065196 Potato plasma membrane 55.69 54.65
KRH03412 Soybean plasma membrane 55.0 54.44
Bra016534.1-P Field mustard plastid 90.86 51.07
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 49.14 50.89
GSMUA_Achr4P22320_001 Banana plasma membrane 43.79 50.2
Zm00001d013529_P002 Maize plasma membrane 50.0 49.07
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 49.66 48.9
EER91066 Sorghum cytosol, peroxisome, plasma membrane 49.66 48.57
Os03t0687000-02 Rice plasma membrane 49.14 48.55
GSMUA_Achr5P15030_001 Banana cytosol 39.48 48.31
TraesCS4D01G026800.1 Wheat golgi, unclear 49.48 48.15
TraesCS4A01G283900.1 Wheat golgi, unclear 49.48 48.07
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 49.31 48.07
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 49.48 47.75
Os12t0638300-01 Rice extracellular, plasma membrane 47.41 46.85
Zm00001d031213_P001 Maize plasma membrane 40.86 46.56
TraesCS2B01G057700.1 Wheat plasma membrane 47.93 46.41
TraesCS2A01G045500.1 Wheat plasma membrane 47.76 46.24
TraesCS2D01G044200.1 Wheat plasma membrane 47.76 46.24
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 47.41 45.53
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 47.41 45.3
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 47.41 45.01
TraesCS2D01G044000.1 Wheat plasma membrane 46.55 44.85
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 46.72 44.79
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 45.86 44.78
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 47.24 44.77
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.17 44.56
EES16414 Sorghum cytosol, peroxisome, plasma membrane 45.86 44.56
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 47.07 44.46
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 46.38 43.81
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 46.21 43.51
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 45.69 42.88
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 43.1 42.3
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 40.52 41.37
EER98133 Sorghum plasma membrane 46.21 41.17
Bra016259.1-P Field mustard plastid 43.45 40.51
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 23.79 40.12
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 46.55 39.36
Bra038366.1-P Field mustard plasma membrane 30.69 38.36
Bra016260.1-P Field mustard plasma membrane 36.21 38.11
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 37.59 36.82
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 37.76 36.74
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 38.1 36.59
Bra009996.1-P Field mustard peroxisome 35.34 36.03
Bra020609.1-P Field mustard plasma membrane 34.48 34.97
Bra033836.1-P Field mustard plasma membrane 31.21 34.67
Bra027185.1-P Field mustard plasma membrane 34.48 33.73
Bra033955.1-P Field mustard plasma membrane 31.72 33.52
Bra021295.1-P Field mustard plasma membrane 31.38 32.67
Bra018952.1-P Field mustard plasma membrane 33.79 32.34
Bra033884.1-P Field mustard plasma membrane 12.59 29.32
Bra021168.1-P Field mustard plasma membrane 33.79 22.5
Bra038280.1-P Field mustard plasma membrane 29.48 15.31
Bra008953.1-P Field mustard plasma membrane 28.79 10.8
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EnsemblPlantsGene:Bra025695EnsemblPlants:Bra025695.1EnsemblPlants:Bra025695.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4EA87InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000253F4CDSEG:seg::::
Description
AT1G18880 (E=2e-283) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA06:+:7347776..7349946
Molecular Weight (calculated)
64557.3 Da
IEP (calculated)
9.295
GRAVY (calculated)
0.278
Length
580 amino acids
Sequence
(BLAST)
001: MEAEKTEKKI TGEDDDESKI IYRGWKVMPF IIGNETFEKL GIVGSSSNLV IYLTTVFNMK SITAATVVNI YSGTSNFGTI VAAFLCDSYF GRYKTLSVAM
101: IACFLGSVAM DLTAVINQLH PAKCAKEIGS VCKGPSIVQI MFLAGAMVLL VIGAGGIRPC NLPFGADQFD PKTKEGKRGI ESFFNWYFFT FTFAQMVSLT
201: VIVYVQSNVS WSIGLAIPAI LMFLGCIIFF SGSKLYVKVK PSGSPIHSIT RVIVVAIKKR KLNLVGSMYN HTAKDFRNSK LSHTEQFRFL DKAAIQTPDD
301: KLNIDGSPAD PWKLCSMQQV EEVKCVIRVL PVWLSAALFY VAYIQQTTYT IFQSLQSDRH LGSKSFQIPP ATYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDSGITQLQ RVGAGMFLCI TSMMVSATVE QHRRTVALTR PPLGFALRKG AISSMSGMWL IPQLVLMGVG DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLSS FLLSAVHNIT EGSLGGNWLP EDLNKGRLEY FYYFVAGMMT INFAYFLLVS HWYRYKDVVA KDNDIDKVSV
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.