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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 88.61 75.93
EES16414 Sorghum cytosol, peroxisome, plasma membrane 88.8 75.71
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 69.94 58.94
Os12t0638300-01 Rice extracellular, plasma membrane 67.78 58.77
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 67.78 58.67
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 70.53 58.66
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 70.53 58.47
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 69.94 58.27
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 69.35 58.15
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 70.33 58.12
TraesCS2B01G057700.1 Wheat plasma membrane 67.98 57.76
TraesCS2A01G045500.1 Wheat plasma membrane 67.78 57.6
TraesCS2D01G044200.1 Wheat plasma membrane 67.58 57.43
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 68.96 56.8
TraesCS2D01G044000.1 Wheat plasma membrane 66.8 56.48
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 67.98 56.35
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 66.6 56.03
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 68.76 51.02
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 53.83 48.93
Zm00001d013529_P002 Maize plasma membrane 55.8 48.05
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 55.6 48.05
GSMUA_Achr5P15030_001 Banana cytosol 44.6 47.89
PGSC0003DMT400065197 Potato mitochondrion 52.85 45.98
VIT_14s0066g02590.t01 Wine grape plasma membrane 52.85 45.98
Solyc03g113430.2.1 Tomato plasma membrane 52.46 45.64
Solyc03g113420.2.1 Tomato plasma membrane 52.26 45.32
Bra035886.1-P Field mustard plasma membrane 44.2 45.27
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 26.72 44.88
PGSC0003DMT400065196 Potato plasma membrane 52.06 44.84
Solyc06g071570.2.1 Tomato plasma membrane 50.69 44.64
PGSC0003DMT400069660 Potato plasma membrane 50.49 44.46
CDY45756 Canola plasma membrane 49.51 44.13
KRH56970 Soybean cytosol, peroxisome, plasma membrane 49.9 42.55
KRH56968 Soybean plasma membrane 49.71 42.45
KRH03408 Soybean cytosol, peroxisome, plasma membrane 49.12 42.23
CDY30731 Canola plasma membrane 49.12 41.74
KRH56969 Soybean plasma membrane 50.1 41.73
KRH03409 Soybean plasma membrane 49.9 41.5
CDX83801 Canola cytosol, peroxisome, plasma membrane 48.13 41.46
Bra029248.1-P Field mustard plasma membrane 49.71 41.34
CDY45754 Canola plasma membrane 48.72 41.2
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 47.35 41.06
CDX84344 Canola plasma membrane 48.53 41.03
CDY09846 Canola plasma membrane 34.58 41.03
CDY00315 Canola plasma membrane 49.31 41.01
Bra010111.1-P Field mustard plasma membrane 49.31 41.01
CDX81902 Canola cytosol, peroxisome, plasma membrane 47.54 40.88
CDY26715 Canola plasma membrane 46.56 40.86
Bra025695.1-P Field mustard plasma membrane 46.56 40.86
KRH03412 Soybean plasma membrane 46.95 40.78
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 49.31 40.75
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 47.35 40.71
Bra035885.1-P Field mustard peroxisome 44.79 40.43
CDY21692 Canola plasma membrane 45.58 40.42
CDY16763 Canola peroxisome 45.19 40.07
CDX87266 Canola peroxisome 44.6 39.62
CDX96690 Canola plasma membrane 46.76 39.21
Bra019521.1-P Field mustard plasma membrane 46.95 39.12
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 46.95 38.86
CDY36913 Canola cytosol, peroxisome, plasma membrane 46.95 38.86
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 46.95 38.86
CDY51783 Canola cytosol, peroxisome, plasma membrane 45.97 38.81
CDX83027 Canola cytosol, peroxisome, plasma membrane 45.78 38.7
CDX68450 Canola cytosol, peroxisome, plasma membrane 46.56 38.54
AT3G47960.1 Thale cress plasma membrane 47.54 38.05
CDY21805 Canola cytosol, peroxisome, plasma membrane 45.97 37.68
CDY69433 Canola golgi, peroxisome, plastid 46.76 37.54
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 42.24 36.26
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 41.85 35.86
Zm00001d038185_P001 Maize plasma membrane 35.95 34.86
Zm00001d038180_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 20.83 33.76
Zm00001d038186_P002 Maize cytosol, peroxisome, plasma membrane 38.9 33.17
Zm00001d050456_P001 Maize plasma membrane 31.63 31.51
Zm00001d038181_P001 Maize plasma membrane 37.13 31.4
Zm00001d043374_P001 Maize plasma membrane 36.54 31.37
Zm00001d001976_P001 Maize plastid 39.69 30.15
Zm00001d043375_P001 Maize plasma membrane 37.33 29.73
Zm00001d038179_P001 Maize cytosol, nucleus, plasma membrane 17.09 28.71
Bra016534.1-P Field mustard plastid 47.74 23.55
VIT_17s0000g05550.t01 Wine grape plasma membrane 53.44 15.87
Protein Annotations
MapMan:24.2.2.9UniProt:A0A1D6KGY4GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:MFS_trans_sf
ProteinID:ONM02337.1PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0008432BB6EnsemblPlantsGene:Zm00001d031213EnsemblPlants:Zm00001d031213_P001EnsemblPlants:Zm00001d031213_T001SEG:seg
Description
LigA
Coordinates
chr1:-:182385065..182386594
Molecular Weight (calculated)
55002.3 Da
IEP (calculated)
8.920
GRAVY (calculated)
0.410
Length
509 amino acids
Sequence
(BLAST)
001: MSGASAATLL SLWSGTVNLA PLLGAFLSDT YMGRYATIAF ASMASFLGMI VLTLTAAVPS LHPAANSSTT GGPSSLQMAV LLASFALLAV GAGGIRPCNL
101: AFGADQFDPR TPAGRRGINS FFNWYYFTFT IAMMVSATVI IYLQSDVSWA LGLAVPATLM GLSCALFFMG TRLYVRVPPE GSPFTSFAQV LVAAARKRRL
201: PAPRADLYDP PHRSSLISKI AYTDQFLCLD KAAVRTPEDG PAPNPWRLCT LQQVEEVKCL ARLLPVWSSG IVYYIVLTNL GNYNVLQAMQ TDRRVGRGGF
301: HIPAGSFVVF NMLALTLWLP FYDGVLVPAM QRLTGREGGI TQLQRIGTGI VLSIVTMLVA AAVERHRRRL GDSASCFLLV PQQMLAGLSE AFGIIGQVDF
401: YYKQFPENMR SVAGAMLFLA FAIASYASGL MVSVVHRTTG GPDGRPDWLA QDLNQGHVDL YYLLIAAMAA VNLVYFVACA RWYRFKNPAA ADVEQLELEL
501: EGKAAAPPV
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.