Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069660 | Potato | plasma membrane | 97.58 | 97.58 |
| Solyc06g071090.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 45.16 | 86.14 |
| Solyc03g113430.2.1 | Tomato | plasma membrane | 64.36 | 63.59 |
| Solyc03g113420.2.1 | Tomato | plasma membrane | 60.55 | 59.63 |
| GSMUA_Achr5P15010_001 | Banana | cytosol, peroxisome, plasma membrane | 55.02 | 56.79 |
| GSMUA_Achr5P15030_001 | Banana | cytosol | 45.5 | 55.49 |
| GSMUA_Achr4P22320_001 | Banana | plasma membrane | 47.75 | 54.55 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 53.81 | 52.8 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 53.98 | 52.61 |
| Os03t0687000-02 | Rice | plasma membrane | 53.29 | 52.47 |
| Zm00001d013529_P002 | Maize | plasma membrane | 53.46 | 52.28 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 52.6 | 51.01 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.42 | 50.92 |
| TraesCS4A01G283900.1 | Wheat | golgi, unclear | 52.42 | 50.75 |
| HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 52.77 | 50.75 |
| Zm00001d031213_P001 | Maize | plasma membrane | 44.64 | 50.69 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 49.31 | 48.55 |
| TraesCS2A01G045500.1 | Wheat | plasma membrane | 49.65 | 47.91 |
| HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 50.0 | 47.85 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 48.62 | 47.79 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 49.31 | 47.58 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 49.48 | 47.51 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.48 | 47.27 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 48.96 | 47.25 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.17 | 47.23 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 49.48 | 47.12 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 48.62 | 47.07 |
| TraesCS5A01G037900.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.0 | 46.92 |
| TraesCS5A01G004400.1 | Wheat | cytosol, nucleus, plasma membrane | 49.65 | 46.9 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 49.48 | 46.81 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 48.1 | 46.8 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 50.0 | 46.76 |
| HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 49.31 | 46.42 |
| EER98133 | Sorghum | plasma membrane | 52.25 | 46.39 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 45.16 | 43.0 |
| HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 49.65 | 41.84 |
| Solyc05g009500.2.1 | Tomato | plasma membrane | 36.51 | 36.82 |
| Solyc12g007220.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.81 | 35.32 |
| Solyc03g113440.2.1 | Tomato | plasma membrane | 36.16 | 35.07 |
| Solyc04g005070.2.1 | Tomato | plasma membrane | 34.43 | 34.73 |
| Solyc05g006010.2.1 | Tomato | plasma membrane | 35.12 | 34.7 |
| Solyc05g005950.2.1 | Tomato | plasma membrane | 34.26 | 34.38 |
| Solyc05g005980.2.1 | Tomato | plasma membrane | 34.43 | 34.37 |
| Solyc05g006000.2.1 | Tomato | plasma membrane | 34.6 | 34.13 |
| Solyc08g066940.2.1 | Tomato | plasma membrane | 29.93 | 33.72 |
| Solyc12g044310.1.1 | Tomato | plasma membrane | 36.51 | 33.55 |
| Solyc06g075490.1.1 | Tomato | plasma membrane | 31.83 | 33.52 |
| Solyc05g005970.2.1 | Tomato | plasma membrane | 33.39 | 33.28 |
| Solyc05g005940.2.1 | Tomato | plasma membrane | 33.22 | 33.16 |
| Solyc05g005920.2.1 | Tomato | plasma membrane | 33.39 | 33.1 |
| Solyc11g072570.1.1 | Tomato | plasma membrane | 32.01 | 33.09 |
| Solyc06g075480.2.1 | Tomato | plasma membrane | 31.49 | 32.85 |
| Solyc05g005960.2.1 | Tomato | plasma membrane | 32.35 | 32.47 |
| Solyc06g005070.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 17.65 | 32.38 |
| Solyc06g075450.1.1 | Tomato | extracellular, plasma membrane, vacuole | 30.28 | 32.05 |
| Solyc11g072560.1.1 | Tomato | plasma membrane | 28.37 | 31.91 |
| Solyc03g120560.2.1 | Tomato | plasma membrane | 33.22 | 31.84 |
| Solyc06g075440.1.1 | Tomato | plasma membrane | 29.24 | 31.83 |
| Solyc06g075500.2.1 | Tomato | plasma membrane | 29.58 | 31.49 |
| Solyc03g120550.2.1 | Tomato | plasma membrane | 33.91 | 30.62 |
| Solyc05g005990.2.1 | Tomato | plasma membrane | 24.22 | 30.5 |
| Solyc11g072580.1.1 | Tomato | plasma membrane | 28.89 | 30.42 |
| Solyc12g095810.1.1 | Tomato | plasma membrane | 31.14 | 27.4 |
| Solyc05g005910.2.1 | Tomato | plasma membrane | 34.26 | 26.23 |
| VIT_17s0000g05550.t01 | Wine grape | plasma membrane | 66.61 | 22.46 |
Protein Annotations
| MapMan:24.2.2.9 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | UniProt:K4C8M9 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF59 |
| SUPFAM:SSF103473 | EnsemblPlantsGene:Solyc06g071570.2 | EnsemblPlants:Solyc06g071570.2.1 | TMHMM:TMhelix | UniParc:UPI00027672C1 | SEG:seg |
Description
No Description!
Coordinates
chr6:+:44061790..44064662
Molecular Weight (calculated)
64142.3 Da
IEP (calculated)
8.670
GRAVY (calculated)
0.296
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETNKESTK DEIKYRGIRA MPFVIGNETF EKLGTIGSSS NLLVYLTSIF HLKSITATNI VNIFNGTCNF GTLLGAFLSD TYFGRYNILG FASVCSFLGM
101: LVLTLTAAVS KFHPPECGNQ ETAPVCVGPT AGQMTFLLGG FGLLVIGASG IRPCSLAFGA DQFDPNTESG RRGVMSFFNW YYFTRTFAVM VSLTVIVYVQ
201: SNISWSLGLA IPTITMFLSC ALFFVGTKIY VRFVPKGSPL SSVAQVLVAA FKKRHLQLPE QPCFSLFNYV PSNSLNSMLP YTNQFRFLSK AAVKTPEDHI
301: NSSDGSAVDP WRLCSIQQVE EVKCLLRVIP IWVAGTIYYV SVVQSQNYVI FQALQSDNQL GHINFHIPPA SFIVISMLSI TIWLPIYDRV LLPWLRKFTG
401: KEDGITLLQK MGIGIFLSIA TMILSGIVED KRRTLAMTRP MLQMTQGKGA ISSMSGLWLI PQMALAGLSE AFTLISENEF FYKQCPENMR SIAASFFFVG
501: MAGSSYLSSF LTSVVHKTSS WLAEDLNKGK LDSFYYLIAG LEILNLGYFL VCAKWYKYKG RAGDNKVSER TDQNEIVI
101: LVLTLTAAVS KFHPPECGNQ ETAPVCVGPT AGQMTFLLGG FGLLVIGASG IRPCSLAFGA DQFDPNTESG RRGVMSFFNW YYFTRTFAVM VSLTVIVYVQ
201: SNISWSLGLA IPTITMFLSC ALFFVGTKIY VRFVPKGSPL SSVAQVLVAA FKKRHLQLPE QPCFSLFNYV PSNSLNSMLP YTNQFRFLSK AAVKTPEDHI
301: NSSDGSAVDP WRLCSIQQVE EVKCLLRVIP IWVAGTIYYV SVVQSQNYVI FQALQSDNQL GHINFHIPPA SFIVISMLSI TIWLPIYDRV LLPWLRKFTG
401: KEDGITLLQK MGIGIFLSIA TMILSGIVED KRRTLAMTRP MLQMTQGKGA ISSMSGLWLI PQMALAGLSE AFTLISENEF FYKQCPENMR SIAASFFFVG
501: MAGSSYLSSF LTSVVHKTSS WLAEDLNKGK LDSFYYLIAG LEILNLGYFL VCAKWYKYKG RAGDNKVSER TDQNEIVI
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.