Factsheet for Solyc05g005910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010578	Potato	plasma membrane	54.04	93.15
Solyc05g005980.2.1	Tomato	plasma membrane	61.19	79.79
Solyc05g005970.2.1	Tomato	plasma membrane	61.06	79.48
Solyc05g005920.2.1	Tomato	plasma membrane	59.74	77.36
Solyc05g005950.2.1	Tomato	plasma membrane	57.48	75.35
Solyc05g005940.2.1	Tomato	plasma membrane	56.82	74.09
Solyc05g005960.2.1	Tomato	plasma membrane	55.63	72.92
Solyc04g005070.2.1	Tomato	plasma membrane	46.89	61.78
Solyc05g006000.2.1	Tomato	plasma membrane	44.64	57.51
Solyc05g006010.2.1	Tomato	plasma membrane	43.97	56.75
Solyc05g005990.2.1	Tomato	plasma membrane	34.44	56.64
Solyc08g066940.2.1	Tomato	plasma membrane	37.22	54.78
VIT_11s0016g03600.t01	Wine grape	plasma membrane	40.26	52.14
KRH04819	Soybean	plasma membrane	37.75	49.39
KRH16178	Soybean	plasma membrane	37.35	48.21
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	35.63	45.9
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	32.05	44.0
Solyc12g044310.1.1	Tomato	plasma membrane	36.29	43.56
Solyc03g120560.2.1	Tomato	plasma membrane	34.44	43.12
Solyc03g120550.2.1	Tomato	plasma membrane	34.97	41.25
Solyc12g095810.1.1	Tomato	plasma membrane	34.3	39.42
Solyc05g009500.2.1	Tomato	plasma membrane	27.28	35.95
Solyc11g072570.1.1	Tomato	plasma membrane	26.36	35.6
VIT_04s0008g03580.t01	Wine grape	plasma membrane	54.57	34.89
Solyc03g113430.2.1	Tomato	plasma membrane	26.62	34.36
Solyc06g071570.2.1	Tomato	plasma membrane	26.23	34.26
Solyc11g072560.1.1	Tomato	plasma membrane	23.18	34.05
Solyc06g075440.1.1	Tomato	plasma membrane	23.84	33.9
Solyc06g075500.2.1	Tomato	plasma membrane	24.37	33.89
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	13.38	33.33
Solyc06g075480.2.1	Tomato	plasma membrane	24.11	32.85
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	26.36	32.78
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	23.58	32.6
Solyc03g113420.2.1	Tomato	plasma membrane	25.17	32.37
Solyc06g075490.1.1	Tomato	plasma membrane	23.44	32.24
Solyc03g113440.2.1	Tomato	plasma membrane	24.64	31.21
Solyc11g072580.1.1	Tomato	plasma membrane	22.65	31.15
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	12.58	30.16

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:K4BWB8	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654
PANTHER:PTHR11654:SF150	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc05g005910.2	EnsemblPlants:Solyc05g005910.2.1	TMHMM:TMhelix	UniParc:UPI0002767003
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:-:697948..703061

Molecular Weight (calculated)

84095.0 Da

IEP (calculated)

6.436

GRAVY (calculated)

0.396

Length

755 amino acids

Sequence
(BLAST)

001: MRTEIRQVEE QPRKGGLRTM PFIIVNESFE MIATYGLQTN MLIYLMTFYN MSAATATTIL GLWAALSNGM AIVGAIVADS YCGRFRAVAF GSISTLIGMI
101: VLWLTTMIPE LTSLSCSHFQ HVCNGTTPIQ LAVLFSSFGF MSIGAGFVRP CSIIFGADQL EDKKNPENQR RIASYFNWYY MERETELAEE KTRKGGLRTM
201: PFIILNESFE RIASYGLVMN MIIYLMAYYN MSAATGTSIL ALWAALSNGL AIVGAIVADS YCGRFKAVAF GSISTLIGMI ILWLTAMIPQ LKSLPCSHFQ
301: HVCNGTTTIQ LAVLFSSFVF MSIGTGFVRP CSIIFGADQL GEKENHENQR VLDSYFNWYY ASTGISTILA VTVIVYIQDR YGWKVGFGIP VILMFLSVSM
401: FLIGSPLYVK VKAKENLLIG LLQAIVAVFR KRNTRLTLTD CDNYYHSPLE SEILTPSNDF RCLNRACVIE DPRKDLNPDG SASNPWSLCS VEQVELLKAL
501: IRVLPMWSTG FMIFVALSQF SSVLQAKTMD RHIFPHFEIP AASFSVFMII ALTIWITFYD RVLVPLLSKY TGQPRGLSPV IRMGIGLIVT CMSMALSAIT
601: ESIRRQLAIE EGHEDDPSAL VNMSAMWLVP QYALLGVAEG SHSVGQIEFF YSLLPKSMSS MASAMYTVGT AVSSLVVSIL VSGVDWLSST GGKTSWLSSN
701: INRGHLDYYF WLLTFLSLLN FFYFLLICRL YEPDNDGSIR LSDETEETLM LLPES

Best Arabidopsis Sequence Match ( AT3G16180.1 )
(BLAST)

001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N

Arabidopsis Description

NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.