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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065303 Potato plasma membrane 85.99 84.03
Solyc11g072570.1.1 Tomato plasma membrane 78.79 72.45
Solyc06g075440.1.1 Tomato plasma membrane 51.56 49.91
VIT_06s0004g03530.t01 Wine grape plasma membrane 54.67 48.7
VIT_06s0004g03520.t01 Wine grape plasma membrane 54.47 48.53
CDX86030 Canola plasma membrane 25.49 48.16
Solyc06g075480.2.1 Tomato plasma membrane 51.56 47.83
Solyc06g075500.2.1 Tomato plasma membrane 50.39 47.7
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 49.42 46.52
Solyc06g075490.1.1 Tomato plasma membrane 49.42 46.27
KRH22952 Soybean plasma membrane 46.69 44.36
Bra033836.1-P Field mustard plasma membrane 44.55 43.87
CDY48147 Canola plasma membrane 46.69 43.56
AT3G45650.2 Thale cress plasma membrane 49.22 43.32
CDX99152 Canola plasma membrane 46.89 43.27
Solyc11g072580.1.1 Tomato plasma membrane 46.11 43.17
AT3G45700.1 Thale cress plasma membrane 45.53 42.7
AT3G45680.1 Thale cress plasma membrane 46.3 42.65
AT3G45660.2 Thale cress plasma membrane 47.86 42.56
CDX81495 Canola plasma membrane 42.61 42.2
CDY18499 Canola plasma membrane 45.72 42.19
Bra033955.1-P Field mustard plasma membrane 44.94 42.08
CDY12696 Canola plasma membrane 42.22 41.97
Bra021295.1-P Field mustard plasma membrane 45.33 41.83
AT3G45690.1 Thale cress plasma membrane 41.25 41.09
AT3G45710.1 Thale cress plasma membrane 44.16 40.54
CDX99151 Canola plasma membrane 42.41 39.28
AT3G45720.1 Thale cress plasma membrane 41.83 38.74
TraesCS5B01G152000.1 Wheat plasma membrane 42.41 38.31
TraesCS7D01G049400.1 Wheat plasma membrane 41.25 37.86
GSMUA_Achr6P15780_001 Banana plasma membrane 36.58 37.68
TraesCS5D01G158500.1 Wheat plasma membrane 41.83 37.59
TraesCS7D01G049300.1 Wheat plasma membrane 40.27 37.57
TraesCS4A01G440300.1 Wheat plasma membrane 40.08 37.39
TraesCS4A01G440400.1 Wheat plasma membrane 40.08 37.39
TraesCS7A01G054000.2 Wheat plasma membrane 40.08 37.39
TraesCS7A01G054100.1 Wheat plasma membrane 40.66 37.25
TraesCS4A01G440700.1 Wheat plasma membrane 40.47 37.21
TraesCS4A01G440600.1 Wheat plasma membrane 39.88 37.21
GSMUA_Achr10P... Banana plasma membrane 34.44 37.11
TraesCS4A01G440500.1 Wheat plasma membrane 39.69 37.02
TraesCS5A01G153200.1 Wheat plasma membrane 42.02 36.99
TraesCS7D01G119800.1 Wheat plasma membrane 39.88 36.87
TraesCS7A01G121600.1 Wheat plastid 39.49 36.71
TraesCS7D01G119900.1 Wheat plasma membrane 39.88 36.09
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 39.88 36.09
HORVU7Hr1G025670.1 Barley plasma membrane 39.49 35.8
HORVU5Hr1G047970.5 Barley mitochondrion 41.83 35.77
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 40.27 35.75
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 39.49 35.68
TraesCS7B01G020500.1 Wheat plasma membrane 39.3 35.56
HORVU7Hr1G025680.3 Barley plasma membrane 38.33 34.56
TraesCS7B01G020300.1 Wheat plasma membrane 39.49 34.12
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 23.93 31.7
Solyc03g113430.2.1 Tomato plasma membrane 35.6 31.28
Os05t0338900-00 Rice plasma membrane 12.26 30.73
Solyc08g066940.2.1 Tomato plasma membrane 30.16 30.21
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 34.44 30.2
Solyc05g009500.2.1 Tomato plasma membrane 33.46 30.02
Solyc05g005940.2.1 Tomato plasma membrane 32.68 29.02
Solyc05g005920.2.1 Tomato plasma membrane 32.3 28.47
Solyc05g005950.2.1 Tomato plasma membrane 31.91 28.47
Solyc06g071570.2.1 Tomato plasma membrane 31.91 28.37
Solyc03g120560.2.1 Tomato plasma membrane 33.07 28.19
Solyc05g005960.2.1 Tomato plasma membrane 31.52 28.12
Solyc03g113420.2.1 Tomato plasma membrane 32.1 28.11
Solyc04g005070.2.1 Tomato plasma membrane 31.32 28.1
Solyc05g005980.2.1 Tomato plasma membrane 31.52 27.98
Solyc05g005970.2.1 Tomato plasma membrane 31.32 27.76
Solyc12g044310.1.1 Tomato plasma membrane 33.66 27.5
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 16.15 27.39
CDX86031 Canola plasma membrane 8.17 27.1
Solyc03g120550.2.1 Tomato plasma membrane 33.66 27.03
Solyc05g006000.2.1 Tomato plasma membrane 30.35 26.62
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 31.13 26.36
Solyc05g006010.2.1 Tomato plasma membrane 29.77 26.15
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 15.56 25.4
Solyc03g113440.2.1 Tomato plasma membrane 28.79 24.83
Solyc12g095810.1.1 Tomato plasma membrane 30.35 23.74
Solyc05g005910.2.1 Tomato plasma membrane 34.05 23.18
Solyc05g005990.2.1 Tomato plasma membrane 20.62 23.09
Bra038280.1-P Field mustard plasma membrane 42.41 19.52
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
UniProt:K4DAW3InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654
PANTHER:PTHR11654:SF19InterPro:PTR2_symporter_CSSUPFAM:SSF103473EnsemblPlantsGene:Solyc11g072560.1EnsemblPlants:Solyc11g072560.1.1TMHMM:TMhelix
UniParc:UPI0002769CBB:::::
Description
No Description!
Coordinates
chr11:-:55737804..55740424
Molecular Weight (calculated)
56795.0 Da
IEP (calculated)
8.532
GRAVY (calculated)
0.538
Length
514 amino acids
Sequence
(BLAST)
001: MENSVIHVDE VAMQSSSTRK NGGWITFPFI IATMAGLSLA AGGWTSNLIV FLINEFNMKS IAAAKVFNVV NGLTTIFPIV GGIIADSYLG CFTVIWISSL
101: ISALGIFFLL LTAVIDALRP LACGDGSSLC TSPTTKQYVF LYVALALASI GVGGTRFTVA PMGAYQFDKL KHQTMFFDWY IFIFYLCWAL STAFIVYVED
201: NISWAWGFGI SMACNILGLA IFLAGKRFYR HVKVQGGSPF VNLARVVVAA TQKWRAPLSE QTQHYYHDHL TTSPIPTKSF KFLNCAAFIT EGDTKPDGSI
301: SNPWRLCTVQ QVEDLKSLIK LFPLWASGLL ISTQLVMQLS LLTLQALKMD RHIGPHFEIP AGSMLVFILL FTCIAISIID RILNPFLSKY TKFTLTPLQR
401: VGIGHALTIA CMAVSALVES RRLRVAKSHH LQGQKDAIVP MSVFWLLPQL ALNGIGEGFH FPGHIAFYYQ EFPTSLKNTS TAMVSLFIGI DGCLIISMMG
501: EWTMYSGFVV PWDQ
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.