Factsheet for Solyc05g005950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005940.2.1	Tomato	plasma membrane	92.88	92.4
Solyc05g005960.2.1	Tomato	plasma membrane	91.15	91.15
PGSC0003DMT400040275	Potato	plasma membrane	94.27	91.11
Solyc05g005980.2.1	Tomato	plasma membrane	77.08	76.68
Solyc05g005970.2.1	Tomato	plasma membrane	76.91	76.38
Solyc05g005920.2.1	Tomato	plasma membrane	76.91	75.99
Solyc04g005070.2.1	Tomato	plasma membrane	57.47	57.77
Solyc05g005910.2.1	Tomato	plasma membrane	75.35	57.48
Solyc05g006010.2.1	Tomato	plasma membrane	55.38	54.53
Solyc05g005990.2.1	Tomato	plasma membrane	43.06	54.03
Solyc05g006000.2.1	Tomato	plasma membrane	54.86	53.92
Solyc08g066940.2.1	Tomato	plasma membrane	47.22	53.02
VIT_11s0016g03600.t01	Wine grape	plasma membrane	48.44	47.86
KRH04819	Soybean	plasma membrane	47.05	46.97
KRH16178	Soybean	plasma membrane	45.83	45.13
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.23	42.49
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	39.24	41.09
Solyc03g120560.2.1	Tomato	plasma membrane	42.71	40.8
Solyc12g044310.1.1	Tomato	plasma membrane	43.75	40.06
Solyc03g120550.2.1	Tomato	plasma membrane	44.1	39.69
Solyc12g095810.1.1	Tomato	plasma membrane	40.1	35.16
Solyc05g009500.2.1	Tomato	plasma membrane	34.72	34.9
Solyc06g071570.2.1	Tomato	plasma membrane	34.38	34.26
Solyc03g113430.2.1	Tomato	plasma membrane	34.2	33.68
Solyc11g072570.1.1	Tomato	plasma membrane	31.94	32.92
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	17.19	32.67
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	34.2	32.45
Solyc03g113420.2.1	Tomato	plasma membrane	32.81	32.2
Solyc11g072560.1.1	Tomato	plasma membrane	28.47	31.91
Solyc06g075500.2.1	Tomato	plasma membrane	30.03	31.86
Solyc06g075480.2.1	Tomato	plasma membrane	30.03	31.23
Solyc06g075440.1.1	Tomato	plasma membrane	28.3	30.7
Solyc03g113440.2.1	Tomato	plasma membrane	31.6	30.54
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	28.47	30.04
Solyc06g075490.1.1	Tomato	plasma membrane	28.47	29.87
Solyc11g072580.1.1	Tomato	plasma membrane	28.12	29.51
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	15.45	28.25
VIT_04s0008g03580.t01	Wine grape	plasma membrane	52.43	25.57

Protein Annotations

MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006857
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
UniProt:K4BWC2	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022
PANTHER:PTHR11654	PANTHER:PTHR11654:SF150	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc05g005950.2	EnsemblPlants:Solyc05g005950.2.1
TMHMM:TMhelix	UniParc:UPI00027671BD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:-:717668..720026

Molecular Weight (calculated)

64168.0 Da

IEP (calculated)

6.433

GRAVY (calculated)

0.293

Length

576 amino acids

Sequence
(BLAST)

001: MGTESQAEIN TRKGGLRTMP FIILNESFER IASYGSQTNM IIYLMTYYNM SAATGTSIIG IWGALSSGLA IVGAIIADCY WGRYNAVAYG TIFTFIGMVI
101: LWLTSMIPQL TTLACSHFQH VCNGPTAFQL AVLFTSFVFT SIGAGFVRPC SIMFGADQLE QKGNPENKKI VESYFNWYYA STGVATMIAV TVIIYIQDRY
201: GWQIGFGIPV ILMVLSVSTF LIGSSLYIKV KPDTNNLLLG LFQAGAAAFR KRKTPLSLTG CDDYYHSPYE TEVLTPSKDF RCLNRACMIE DPERDLNADG
301: SASNPWNLCS VERVESLKAL IRIIPMWSAG FMMFVDMNVF AFSVLQTKTM DRHILPHFEV PAASFSVFLI IALTIWITFY DRVLVPLLSK YTGRPRGLSP
401: VTRMGIGLTV SCMSMALSAI TESIRRKRAI TEGHEDDPNA LVNMSAMWFV PQYALLGIAE ATHGVGQIEF FYTLLPKSMA SIASAMYTVG TAVSSLIGSI
501: LVSSEDWLTS RGGKTSWLSS NINKGHLDYH FWLLALMSFL NLLYFLWVCR FYETGNDELP HVADEEECDY RLLHES

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.