Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- plasma membrane 4
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g03600.t01 | Wine grape | plasma membrane | 29.04 | 58.83 |
| PGSC0003DMT400074797 | Potato | plasma membrane | 25.57 | 56.98 |
| PGSC0003DMT400010578 | Potato | plasma membrane | 21.0 | 56.62 |
| KRH04819 | Soybean | plasma membrane | 27.1 | 55.46 |
| Solyc05g005980.2.1 | Tomato | plasma membrane | 26.93 | 54.92 |
| Solyc05g005910.2.1 | Tomato | plasma membrane | 34.89 | 54.57 |
| PGSC0003DMT400040282 | Potato | plasma membrane | 26.59 | 54.23 |
| Solyc08g066940.2.1 | Tomato | plasma membrane | 23.54 | 54.19 |
| Solyc05g005970.2.1 | Tomato | plasma membrane | 26.5 | 53.97 |
| Solyc05g005920.2.1 | Tomato | plasma membrane | 26.42 | 53.52 |
| KRH16178 | Soybean | plasma membrane | 26.5 | 53.5 |
| Solyc05g005950.2.1 | Tomato | plasma membrane | 25.57 | 52.43 |
| PGSC0003DMT400010582 | Potato | plasma membrane | 24.3 | 51.99 |
| Solyc05g005940.2.1 | Tomato | plasma membrane | 25.49 | 51.99 |
| PGSC0003DMT400004850 | Potato | plasma membrane | 25.15 | 51.83 |
| Solyc04g005070.2.1 | Tomato | plasma membrane | 25.06 | 51.66 |
| PGSC0003DMT400040284 | Potato | plasma membrane | 25.49 | 51.45 |
| Solyc05g005960.2.1 | Tomato | plasma membrane | 24.81 | 50.87 |
| VIT_09s0002g04130.t01 | Wine grape | plasma membrane | 26.59 | 50.48 |
| PGSC0003DMT400040275 | Potato | plasma membrane | 25.4 | 50.34 |
| PGSC0003DMT400040231 | Potato | plasma membrane | 24.81 | 50.0 |
| PGSC0003DMT400040285 | Potato | plasma membrane | 24.72 | 49.91 |
| Solyc05g006010.2.1 | Tomato | plasma membrane | 24.72 | 49.91 |
| Solyc05g006000.2.1 | Tomato | plasma membrane | 24.64 | 49.66 |
| KRH04899 | Soybean | cytosol, peroxisome, plasma membrane | 22.78 | 48.91 |
| Solyc05g005990.2.1 | Tomato | plasma membrane | 18.97 | 48.8 |
| PGSC0003DMT400040277 | Potato | cytosol, nucleus, plasma membrane | 15.58 | 46.12 |
| VIT_14s0066g02590.t01 | Wine grape | plasma membrane | 19.81 | 40.0 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 19.48 | 37.16 |
| VIT_01s0011g03400.t01 | Wine grape | plasma membrane | 18.2 | 36.88 |
| VIT_08s0040g00830.t01 | Wine grape | peroxisome | 17.61 | 34.72 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 16.17 | 33.1 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 15.83 | 32.41 |
| VIT_17s0000g05550.t01 | Wine grape | plasma membrane | 18.12 | 12.49 |
Protein Annotations
| EntrezGene:100245775 | wikigene:100245775 | EntrezGene:100250921 | wikigene:100250921 | MapMan:24.2.2.9 | ProteinID:CBI20867 |
| ProteinID:CBI20867.3 | UniProt:D7SUB8 | EMBL:FN595231 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:IPR020846 | EntrezGene:LOC100245775 | wikigene:LOC100245775 | EntrezGene:LOC100250921 | wikigene:LOC100250921 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF150 | SUPFAM:SSF103473 |
| TMHMM:TMhelix | UniParc:UPI0001BE1848 | ArrayExpress:VIT_04s0008g03580 | EnsemblPlantsGene:VIT_04s0008g03580 | EnsemblPlants:VIT_04s0008g03580.t01 | RefSeq:XP_002281400 |
| RefSeq:XP_002281400.2 | RefSeq:XP_002281412 | RefSeq:XP_002281412.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:+:2926996..2934108
Molecular Weight (calculated)
130301.0 Da
IEP (calculated)
7.051
GRAVY (calculated)
0.324
Length
1181 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQIGAEDTM GLSSNPKNPL HQPSKSRLGG FRTMPFIIVN EVFERISSLG LMPNMILYLM RGYNMKAVDG SNVLFIWSAV THALAIFGAF LSDAYLGRFR
0101: VIALGSFSSL TGMILLWFTA VIPGMKPQPC EQFKDDCNPA TPAQLAVLFS SFGLISIGAG CIRPCSMAFG ADQLDKENPD SERILDSFFN WYYASSAMST
0201: VISLTIIVYI QDHLGWNFGF GVPAILMFFS ALMFLFGSSL YVKEKPSSSL FTGFVQVPFV AFKNRHLNPP CDSDEYYHHS HDKKLTPTNQ LRWLNRACMI
0301: RDPGRDLSSD GSDPNSWSIC SVEQVESLKT LLRLIPIWST GIMILVSMGQ TSFTTLQANT MDRYLTPNFK IPAASFAVST VVVLTIWIPI YDIVLVPILA
0401: RYTGCPRGLS MKFRMGIGLV LSCVAMAVGA ITESVRRRIA NEQGLDEQPA ATLNMSAMWL LPQFILFGFA EAFSAIGQIE FYYSQFSKSM SSIAVALFTV
0501: GIAGSNLVGS LLVNVVNSVT SKGGKESWLS SNLNKGHLDY YYWLITILCL INIIYFLVCC WSYGPFEDEK PGISDEGEAN IDKLQILTVM EQIIAEDQMG
0601: FAPNPNRSRY PPPKPRYGGF RTMPFIIVNQ SLEKVAGFGI MPNMIFYLMN GYHMEAATGS TILFTWSAFS KSLAVFGALL SDFYLGRFRV IAFGSFSSLL
0701: GITLLWLTAM IPWLKPPPCD QLNDNCNSAT PAQLAVLFTS LGLISVGAGC IRPCSIAFGA DQLDNKENPD NDTVLQSFFN WYYASIGVST VIALTFIAYI
0801: QDHLGWKFGF GVPVILMVFS ALMFVLGSSL YIRVKPGKNL LTGFVQVLVV AFKNRCLTLP TDSVGYYNHS SDPKFLAPTS ELRCLNKACI IRDPNRDLNS
0901: DGSTSNPWSL CSVELVESVK SLLRVIPLWS TGIMILMSME QTSFSTLQAN TMDRHITPNF EIPAGTFSVF TIITLTIWLP VYDCLLVPIL ARYTGQLRGL
1001: SPKVRMGIGL VLSCMAMAVA AATEMIRRRI ATKQGLEDQP AATVNMSALW LLPQYVLLGL AEAFNGIGQN EFYYSQFPKS MSSLAGALFT LGLALSSFAG
1101: SLLVNVVNSV TTKGGKESWL SSNLNKGHLD YYYGLIAVLG MINFIYFLVC CRLYGPCEDE KTKLSGEVEV DQFLYSALPS S
0101: VIALGSFSSL TGMILLWFTA VIPGMKPQPC EQFKDDCNPA TPAQLAVLFS SFGLISIGAG CIRPCSMAFG ADQLDKENPD SERILDSFFN WYYASSAMST
0201: VISLTIIVYI QDHLGWNFGF GVPAILMFFS ALMFLFGSSL YVKEKPSSSL FTGFVQVPFV AFKNRHLNPP CDSDEYYHHS HDKKLTPTNQ LRWLNRACMI
0301: RDPGRDLSSD GSDPNSWSIC SVEQVESLKT LLRLIPIWST GIMILVSMGQ TSFTTLQANT MDRYLTPNFK IPAASFAVST VVVLTIWIPI YDIVLVPILA
0401: RYTGCPRGLS MKFRMGIGLV LSCVAMAVGA ITESVRRRIA NEQGLDEQPA ATLNMSAMWL LPQFILFGFA EAFSAIGQIE FYYSQFSKSM SSIAVALFTV
0501: GIAGSNLVGS LLVNVVNSVT SKGGKESWLS SNLNKGHLDY YYWLITILCL INIIYFLVCC WSYGPFEDEK PGISDEGEAN IDKLQILTVM EQIIAEDQMG
0601: FAPNPNRSRY PPPKPRYGGF RTMPFIIVNQ SLEKVAGFGI MPNMIFYLMN GYHMEAATGS TILFTWSAFS KSLAVFGALL SDFYLGRFRV IAFGSFSSLL
0701: GITLLWLTAM IPWLKPPPCD QLNDNCNSAT PAQLAVLFTS LGLISVGAGC IRPCSIAFGA DQLDNKENPD NDTVLQSFFN WYYASIGVST VIALTFIAYI
0801: QDHLGWKFGF GVPVILMVFS ALMFVLGSSL YIRVKPGKNL LTGFVQVLVV AFKNRCLTLP TDSVGYYNHS SDPKFLAPTS ELRCLNKACI IRDPNRDLNS
0901: DGSTSNPWSL CSVELVESVK SLLRVIPLWS TGIMILMSME QTSFSTLQAN TMDRHITPNF EIPAGTFSVF TIITLTIWLP VYDCLLVPIL ARYTGQLRGL
1001: SPKVRMGIGL VLSCMAMAVA AATEMIRRRI ATKQGLEDQP AATVNMSALW LLPQYVLLGL AEAFNGIGQN EFYYSQFPKS MSSLAGALFT LGLALSSFAG
1101: SLLVNVVNSV TTKGGKESWL SSNLNKGHLD YYYGLIAVLG MINFIYFLVC CRLYGPCEDE KTKLSGEVEV DQFLYSALPS S
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.