Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- vacuole 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065197 | Potato | mitochondrion | 23.69 | 69.4 |
| Solyc03g113430.2.1 | Tomato | plasma membrane | 23.63 | 69.23 |
| VIT_14s0066g02590.t01 | Wine grape | plasma membrane | 23.05 | 67.52 |
| Solyc06g071570.2.1 | Tomato | plasma membrane | 22.46 | 66.61 |
| PGSC0003DMT400069660 | Potato | plasma membrane | 22.29 | 66.09 |
| Solyc06g071090.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 11.38 | 64.36 |
| GSMUA_Achr5P15010_001 | Banana | cytosol, peroxisome, plasma membrane | 18.9 | 57.86 |
| GSMUA_Achr4P22320_001 | Banana | plasma membrane | 17.04 | 57.71 |
| GSMUA_Achr5P15030_001 | Banana | cytosol | 15.64 | 56.54 |
| Os03t0687000-02 | Rice | plasma membrane | 19.08 | 55.71 |
| Zm00001d033528_P003 | Maize | cytosol, peroxisome, plasma membrane | 19.02 | 55.35 |
| Zm00001d013529_P002 | Maize | plasma membrane | 19.08 | 55.33 |
| EER91066 | Sorghum | cytosol, peroxisome, plasma membrane | 19.14 | 55.31 |
| Zm00001d031213_P001 | Maize | plasma membrane | 15.87 | 53.44 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 18.49 | 53.19 |
| HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 18.61 | 53.08 |
| TraesCS4A01G283900.1 | Wheat | golgi, unclear | 18.44 | 52.93 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.32 | 52.77 |
| Os12t0638300-01 | Rice | extracellular, plasma membrane | 17.97 | 52.47 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 18.2 | 51.83 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.2 | 51.57 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 17.97 | 51.42 |
| Os12t0638200-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 17.62 | 51.36 |
| TraesCS2A01G045500.1 | Wheat | plasma membrane | 17.91 | 51.25 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 18.03 | 50.91 |
| HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 17.91 | 50.83 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 17.74 | 50.75 |
| TraesCS5A01G004400.1 | Wheat | cytosol, nucleus, plasma membrane | 18.09 | 50.65 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.03 | 50.57 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.03 | 50.33 |
| TraesCS5A01G037900.1 | Wheat | cytosol, peroxisome, plasma membrane | 18.03 | 50.16 |
| HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 17.68 | 49.35 |
| KXG24141 | Sorghum | cytosol, peroxisome, plasma membrane | 17.09 | 49.33 |
| EES16414 | Sorghum | cytosol, peroxisome, plasma membrane | 17.09 | 49.08 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 17.56 | 48.71 |
| EER98133 | Sorghum | plasma membrane | 18.2 | 47.93 |
| HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 17.97 | 44.9 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 15.87 | 43.94 |
| VIT_01s0011g03400.t01 | Wine grape | plasma membrane | 13.3 | 39.11 |
| VIT_08s0040g00830.t01 | Wine grape | peroxisome | 12.37 | 35.39 |
| VIT_11s0016g03600.t01 | Wine grape | plasma membrane | 12.02 | 35.33 |
| VIT_09s0002g04130.t01 | Wine grape | plasma membrane | 12.78 | 35.21 |
| VIT_06s0004g03520.t01 | Wine grape | plasma membrane | 11.79 | 35.01 |
| VIT_06s0004g03530.t01 | Wine grape | plasma membrane | 11.73 | 34.84 |
| VIT_04s0008g03580.t01 | Wine grape | plasma membrane | 12.49 | 18.12 |
Protein Annotations
| Gene3D:1.20.1250.20 | EntrezGene:100241563 | wikigene:100241563 | EntrezGene:100258695 | wikigene:100258695 | EntrezGene:100263850 |
| wikigene:100263850 | MapMan:24.2.2.9 | ProteinID:CCB43121 | ProteinID:CCB43121.1 | UniProt:F6GTB2 | EMBL:FN594950 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | EntrezGene:LOC100241563 | wikigene:LOC100241563 |
| EntrezGene:LOC100258695 | wikigene:LOC100258695 | EntrezGene:LOC100263850 | wikigene:LOC100263850 | InterPro:MFS_dom | InterPro:MFS_trans_sf |
| PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF59 | SUPFAM:SSF103473 | TIGR:TC57372 |
| TIGR:TC61974 | TMHMM:TMhelix | UniParc:UPI0002109FF8 | ArrayExpress:VIT_17s0000g05550 | EnsemblPlantsGene:VIT_17s0000g05550 | EnsemblPlants:VIT_17s0000g05550.t01 |
| unigene:Vvi.1034 | RefSeq:XP_002266777 | RefSeq:XP_002266777.1 | RefSeq:XP_002270558 | RefSeq:XP_002270558.2 | RefSeq:XP_002270812 |
| RefSeq:XP_002270812.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr17:-:6051880..6063502
Molecular Weight (calculated)
189226.0 Da
IEP (calculated)
9.370
GRAVY (calculated)
0.356
Length
1714 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENNEKVVAT DEPKTKHRGI KAMPFVIGNE TFEKLGTIGT STNLLVYLTT VFNMKSITAT TFVNVFNGST NFATLIGAFL CDTYFGRYTT LGFASISSFL
0101: GMLVITLTAA VQKMHPPHCG TTDTGTCIGP TAGQMAFLLS GFGLLVIGAA GIRPCNLAFG ADQFNPETES GKRGISSFFN WYYFTYTFAM MVSLTVIVYV
0201: QSDVSWSLGL AIPTLLMLLS CALFFMGTRI YVKVKPEGSP LKNVAQVIVA AVKKRRLELP GQPWLSLFNH IPANSINSKL PHTDQFRFLS KGAILTPEVQ
0301: INSDGSAANP WRLSSMQKVE EVKCVIRVIP IWAAGIIYYV ALVQQSTYVV FQALQSDRRL GSTGFKIPAA SYTVFTMLSL TIWIPIYDQI IVPLLRRLTG
0401: KEVGITLLQK MGIGMVLAVI TMILSALVEE RRRTLALTKA TVGIEARRGA ISSLSGMWLV PQLTLIGISE GLTIIGQVEF FYKQFPENMR SFAGAFLFCG
0501: IAFSNYLSSF LVSIVHQSTG GTATGNWLPE DLNKGRLDYF YYLVAALGMG STLSSPLERG SLLWATMEKN EKAGTADEPN FEYRGLKAMP FIIGNETFEN
0601: LGTVGTSSNL LVYLTAVFNM KSITAVTLIN IFYGTTNLGT LVGAFLCDTY FGRYKTLGFA TVASFMGMLV ITLTALISKL HPPHCEIEQT GTCIGPTSWQ
0701: IAFLLLGFGL LVIGASGIRP CNLAFGADQF NPITESGKRG LSSFFNWWYF TGTVAMMISL TLVIYVQSDV SWALGLAIPT FLMLLACVLF FMGTRIYVKL
0801: EPKGSPLKSV VQVIVAAARK RQLKLPEQPW LTLFSHVPSN SINSKLPYTD QFRFLDKGAI ITPEDQINSE GLAADPWRLS SIQQVEEVKC LMRVIPIWAS
0901: AIIYYVALAQ QQTYTVFQSL QSDRHLGHSN FKIPAASYSI FSMLGLIIWI PIYDRIMVPL LQRFTGKEGG ITVLQKMGVG MFLSIVTMLV SAFVEHQRRT
1001: LALCAISSMS GLWFIPQLTL VGVSEAFTVI AQVEFFYKQF PESMRSVGGS FSFLGVAVSS YLSSFLVSTV HRMTAGAASG NWLPEDLNKG RLDYFYYLVA
1101: ALGVINLGYF LLCAKWYKYK GSACSTQEVP MERVESEKPL RISSLRETME KNEEIDTADE PEVNYRGVKA MPYIIGNETF EKLGAIGTLS NLLLYVTVVF
1201: NMKSITATTL INIFNGTTNF ATLPGAFLSD TYFGRYKTLG FASISSFMGL LVIALTAAIP NLHPPECGKA SRCIGATAWQ MAFLLTGFGL LVIGAGGIRP
1301: CNLAFGADQF NPKTESGKRG IDSFFNWYFF TLTFAQMVSL TAIVYVQSKV SWGIGLGIPA LLMLLSCVVF FMGTKIYVKV KPTGSPMTSV AQVIVVAVKK
1401: RRLKLPEQPW LSLFSYIPPN SINSKLPYTD QFRFLDKAAV LSPEDQLNPD GSAAYPWRLC SMQQVEEVKC IMRVIPIWSS AIIYHCAIVQ QHTYAVFQAL
1501: QSNRYVGNSK FQIPAASYTV FSMLSLTIWV PIYDRIVVPF LRRITGKEAG ITILQRIGIG IFLSVLTSLV SALVEEWRRT RPIIGVYPRR GGISSMSGFW
1601: LIPQLTLAGL AEAFTAIGQV EFYYKQFPEN MRSIAGSFFF CGMAASSYVS GLLVSIVHRT TAGAKTGNWL PEDLNKGRLD YFYYLVASLG VINLGYFLVC
1701: AKWYTYKGSY QQHP
0101: GMLVITLTAA VQKMHPPHCG TTDTGTCIGP TAGQMAFLLS GFGLLVIGAA GIRPCNLAFG ADQFNPETES GKRGISSFFN WYYFTYTFAM MVSLTVIVYV
0201: QSDVSWSLGL AIPTLLMLLS CALFFMGTRI YVKVKPEGSP LKNVAQVIVA AVKKRRLELP GQPWLSLFNH IPANSINSKL PHTDQFRFLS KGAILTPEVQ
0301: INSDGSAANP WRLSSMQKVE EVKCVIRVIP IWAAGIIYYV ALVQQSTYVV FQALQSDRRL GSTGFKIPAA SYTVFTMLSL TIWIPIYDQI IVPLLRRLTG
0401: KEVGITLLQK MGIGMVLAVI TMILSALVEE RRRTLALTKA TVGIEARRGA ISSLSGMWLV PQLTLIGISE GLTIIGQVEF FYKQFPENMR SFAGAFLFCG
0501: IAFSNYLSSF LVSIVHQSTG GTATGNWLPE DLNKGRLDYF YYLVAALGMG STLSSPLERG SLLWATMEKN EKAGTADEPN FEYRGLKAMP FIIGNETFEN
0601: LGTVGTSSNL LVYLTAVFNM KSITAVTLIN IFYGTTNLGT LVGAFLCDTY FGRYKTLGFA TVASFMGMLV ITLTALISKL HPPHCEIEQT GTCIGPTSWQ
0701: IAFLLLGFGL LVIGASGIRP CNLAFGADQF NPITESGKRG LSSFFNWWYF TGTVAMMISL TLVIYVQSDV SWALGLAIPT FLMLLACVLF FMGTRIYVKL
0801: EPKGSPLKSV VQVIVAAARK RQLKLPEQPW LTLFSHVPSN SINSKLPYTD QFRFLDKGAI ITPEDQINSE GLAADPWRLS SIQQVEEVKC LMRVIPIWAS
0901: AIIYYVALAQ QQTYTVFQSL QSDRHLGHSN FKIPAASYSI FSMLGLIIWI PIYDRIMVPL LQRFTGKEGG ITVLQKMGVG MFLSIVTMLV SAFVEHQRRT
1001: LALCAISSMS GLWFIPQLTL VGVSEAFTVI AQVEFFYKQF PESMRSVGGS FSFLGVAVSS YLSSFLVSTV HRMTAGAASG NWLPEDLNKG RLDYFYYLVA
1101: ALGVINLGYF LLCAKWYKYK GSACSTQEVP MERVESEKPL RISSLRETME KNEEIDTADE PEVNYRGVKA MPYIIGNETF EKLGAIGTLS NLLLYVTVVF
1201: NMKSITATTL INIFNGTTNF ATLPGAFLSD TYFGRYKTLG FASISSFMGL LVIALTAAIP NLHPPECGKA SRCIGATAWQ MAFLLTGFGL LVIGAGGIRP
1301: CNLAFGADQF NPKTESGKRG IDSFFNWYFF TLTFAQMVSL TAIVYVQSKV SWGIGLGIPA LLMLLSCVVF FMGTKIYVKV KPTGSPMTSV AQVIVVAVKK
1401: RRLKLPEQPW LSLFSYIPPN SINSKLPYTD QFRFLDKAAV LSPEDQLNPD GSAAYPWRLC SMQQVEEVKC IMRVIPIWSS AIIYHCAIVQ QHTYAVFQAL
1501: QSNRYVGNSK FQIPAASYTV FSMLSLTIWV PIYDRIVVPF LRRITGKEAG ITILQRIGIG IFLSVLTSLV SALVEEWRRT RPIIGVYPRR GGISSMSGFW
1601: LIPQLTLAGL AEAFTAIGQV EFYYKQFPEN MRSIAGSFFF CGMAASSYVS GLLVSIVHRT TAGAKTGNWL PEDLNKGRLD YFYYLVASLG VINLGYFLVC
1701: AKWYTYKGSY QQHP
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.