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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • cytosol 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 mitochondrion: 24351685
msms PMID: 24351685 doi
F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller
Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g113430.2.1 Tomato plasma membrane 95.38 95.38
PGSC0003DMT400069660 Potato plasma membrane 64.1 64.88
PGSC0003DMT400065196 Potato plasma membrane 62.22 61.59
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 55.56 58.04
GSMUA_Achr4P22320_001 Banana plasma membrane 49.74 57.51
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 56.92 56.54
Zm00001d013529_P002 Maize plasma membrane 57.09 56.51
Os03t0687000-02 Rice plasma membrane 56.24 56.05
EER91066 Sorghum cytosol, peroxisome, plasma membrane 56.58 55.82
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 56.24 55.29
TraesCS4D01G026800.1 Wheat golgi, unclear 56.24 55.2
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 56.58 55.07
GSMUA_Achr5P15030_001 Banana cytosol 44.62 55.06
TraesCS4A01G283900.1 Wheat golgi, unclear 56.07 54.94
Os12t0638300-01 Rice extracellular, plasma membrane 53.16 52.98
TraesCS2D01G044200.1 Wheat plasma membrane 54.19 52.92
Zm00001d031213_P001 Maize plasma membrane 45.98 52.85
TraesCS2A01G045500.1 Wheat plasma membrane 54.02 52.75
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 54.36 52.65
TraesCS2B01G057700.1 Wheat plasma membrane 53.33 52.09
TraesCS2D01G044000.1 Wheat plasma membrane 53.16 51.66
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 53.85 51.47
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 54.02 51.47
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 53.16 51.41
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 53.33 51.4
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 53.68 51.39
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 54.02 51.3
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 51.11 50.85
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 53.33 50.81
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 52.65 49.84
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 50.6 49.83
EES16414 Sorghum cytosol, peroxisome, plasma membrane 49.91 48.91
EER98133 Sorghum plasma membrane 51.97 46.7
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 52.99 45.19
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 44.96 43.4
PGSC0003DMT400037693 Potato plasma membrane 38.8 39.14
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 13.33 37.32
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 13.16 37.02
PGSC0003DMT400074797 Potato plasma membrane 33.5 36.98
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 37.27 36.64
PGSC0003DMT400004850 Potato plasma membrane 35.73 36.47
PGSC0003DMT400040282 Potato plasma membrane 35.73 36.1
PGSC0003DMT400010578 Potato plasma membrane 26.84 35.84
PGSC0003DMT400065303 Potato plasma membrane 32.14 35.74
PGSC0003DMT400040285 Potato plasma membrane 35.73 35.73
PGSC0003DMT400019420 Potato plasma membrane 33.33 35.71
PGSC0003DMT400006545 Potato plasma membrane 28.21 35.33
PGSC0003DMT400040231 Potato plasma membrane 35.38 35.32
PGSC0003DMT400000812 Potato plasma membrane, plastid 33.85 34.98
PGSC0003DMT400016889 Potato plasma membrane 32.99 34.96
PGSC0003DMT400019426 Potato plasma membrane 32.99 34.9
PGSC0003DMT400040284 Potato plasma membrane 34.53 34.53
PGSC0003DMT400019424 Potato mitochondrion 19.83 34.52
PGSC0003DMT400019419 Potato plasma membrane 29.74 34.39
PGSC0003DMT400010582 Potato plasma membrane 32.31 34.24
PGSC0003DMT400068025 Potato plasma membrane 34.7 33.89
PGSC0003DMT400065326 Potato plasma membrane 34.7 33.22
PGSC0003DMT400040275 Potato plasma membrane 33.85 33.22
PGSC0003DMT400075590 Potato plasma membrane 32.14 32.64
PGSC0003DMT400065310 Potato plasma membrane 30.6 32.25
PGSC0003DMT400040277 Potato cytosol, nucleus, plasma membrane 20.51 30.08
VIT_17s0000g05550.t01 Wine grape plasma membrane 69.4 23.69
PGSC0003DMT400016891 Potato plasma membrane 17.95 22.01
Protein Annotations
EntrezGene:102579529MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
UniProt:M1CDJ3InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400025337PGSC:PGSC0003DMG400025337
EnsemblPlants:PGSC0003DMT400065197InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI00029528E2RefSeq:XP_006367063.1::::
Description
Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400025337]
Coordinates
chr3:+:53160486..53162884
Molecular Weight (calculated)
65521.4 Da
IEP (calculated)
9.066
GRAVY (calculated)
0.312
Length
585 amino acids
Sequence
(BLAST)
001: MEVDKVHAKE KPKYGGIKAM PFIIGNETFE KLGTLGTSSN LLVYLTTVFH MKSINATNLV NVFNGTCNFG TLLGAFLCDT YLGRYKTLGI ASISSFTGML
101: FLTLTAAISK LHPLQCGTEE NSICLEPTTG QLAFLLCGFG FLVVGASGIR PCNLAFGADQ FDPNTESGRR GINSFFNWYY FTFTFAMMVS LTVIVYIQSS
201: VSWAIGLAIP TFLMFLSCVF FFIGTKIYVY ILPEGSPLTS MVQVLVAAIK KRRLKLPEQP QNTLFNHVSI KSINSELPYT DQFRFLNKAS ILSPEDKTNE
301: DGSAANPWRL CSIQQVEEVK CVVRVFPIWT AGLIYYVVLV QMQTYVVFQT LQSDRSLYSA SKFKIPAASY SVFSMLSLSI WIPIYDRIIV PFLRKITKKE
401: AGITVLQKMG IGLVIAVLTM LVSAVVETRR RDIALRHPTL GIEPRRGGIS AMSANWLIPQ LALAGLSEAF TIIAQVEFFY KQFPENMRSF AGSFLFCGFA
501: LANYMSSLLI TIVHKTTRIS DTENWLAEDL NKGRLDYFYY LVAALEVLDF GYFLICAKWY KYKGTQNDQK LEVSMDKLQS TKPLV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.