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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g071570.2.1 Tomato plasma membrane 97.58 97.58
PGSC0003DMT400065197 Potato mitochondrion 64.88 64.1
PGSC0003DMT400065196 Potato plasma membrane 60.73 59.39
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 54.84 56.61
GSMUA_Achr5P15030_001 Banana cytosol 45.16 55.06
GSMUA_Achr4P22320_001 Banana plasma membrane 47.4 54.15
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 53.63 52.63
EER91066 Sorghum cytosol, peroxisome, plasma membrane 53.81 52.45
Os03t0687000-02 Rice plasma membrane 52.94 52.13
Zm00001d013529_P002 Maize plasma membrane 53.29 52.12
TraesCS4D01G026800.1 Wheat golgi, unclear 52.25 50.67
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 52.08 50.59
Zm00001d031213_P001 Maize plasma membrane 44.46 50.49
TraesCS4A01G283900.1 Wheat golgi, unclear 52.08 50.42
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 52.25 50.25
Os12t0638300-01 Rice extracellular, plasma membrane 48.62 47.87
TraesCS2A01G045500.1 Wheat plasma membrane 49.13 47.41
TraesCS2D01G044000.1 Wheat plasma membrane 49.13 47.18
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 47.92 47.11
TraesCS2D01G044200.1 Wheat plasma membrane 48.79 47.08
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 49.13 47.02
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 49.13 46.94
EES16414 Sorghum cytosol, peroxisome, plasma membrane 48.44 46.9
TraesCS2B01G057700.1 Wheat plasma membrane 48.44 46.74
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 49.65 46.74
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 47.92 46.63
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 49.65 46.59
EER98133 Sorghum plasma membrane 52.42 46.54
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 49.65 46.44
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 48.62 46.29
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 48.79 46.08
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 48.62 45.99
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 48.27 45.44
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 44.46 42.41
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 49.31 41.55
PGSC0003DMT400037693 Potato plasma membrane 37.2 37.07
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 12.98 35.89
PGSC0003DMT400006545 Potato plasma membrane 28.89 35.76
PGSC0003DMT400010578 Potato plasma membrane 26.82 35.39
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 36.16 35.13
PGSC0003DMT400019420 Potato plasma membrane 33.05 34.98
PGSC0003DMT400019424 Potato mitochondrion 19.9 34.23
PGSC0003DMT400068025 Potato plasma membrane 35.47 34.22
PGSC0003DMT400004850 Potato plasma membrane 33.91 34.21
PGSC0003DMT400074797 Potato plasma membrane 31.31 34.15
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 12.28 34.13
PGSC0003DMT400000812 Potato plasma membrane, plastid 33.39 34.1
PGSC0003DMT400040282 Potato plasma membrane 33.91 33.85
PGSC0003DMT400040285 Potato plasma membrane 34.08 33.68
PGSC0003DMT400010582 Potato plasma membrane 31.83 33.33
PGSC0003DMT400019419 Potato plasma membrane 29.07 33.2
PGSC0003DMT400040284 Potato plasma membrane 33.56 33.16
PGSC0003DMT400040231 Potato plasma membrane 33.56 33.11
PGSC0003DMT400019426 Potato plasma membrane 31.49 32.91
PGSC0003DMT400065303 Potato plasma membrane 29.76 32.7
PGSC0003DMT400016889 Potato plasma membrane 30.97 32.43
PGSC0003DMT400065326 Potato plasma membrane 34.26 32.41
PGSC0003DMT400040275 Potato plasma membrane 33.22 32.21
PGSC0003DMT400075590 Potato plasma membrane 31.66 31.77
PGSC0003DMT400065310 Potato plasma membrane 28.89 30.09
PGSC0003DMT400040277 Potato cytosol, nucleus, plasma membrane 20.07 29.07
VIT_17s0000g05550.t01 Wine grape plasma membrane 66.09 22.29
PGSC0003DMT400016891 Potato plasma membrane 18.34 22.22
Protein Annotations
EntrezGene:102590867MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846
UniProt:M1CKV3InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400027083PGSC:PGSC0003DMG400027083
EnsemblPlants:PGSC0003DMT400069660InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000294D591RefSeq:XP_006347445.1SEG:seg:::
Description
Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400027083]
Coordinates
chr6:+:52407554..52410676
Molecular Weight (calculated)
64286.5 Da
IEP (calculated)
8.555
GRAVY (calculated)
0.294
Length
578 amino acids
Sequence
(BLAST)
001: MEETNKESTK DEIKYRGIRA MPFVIGNETF EKLGTIGSSS NLLVYLTSIF HLKTITATNI VNIFNGTCNF GTLLGAFLSD TYFGRYNILG FASVCSFLGM
101: LVLTLTAAVS KFHPPECGNQ ETAPICVGPT TGQMTFLLGG FGLLVIGASG IRPCSLAFGA DQFDPNTESG RRGVMSFFNW YYFTRTFAVM VSLTIIVYVQ
201: TNISWSLGLA IPTITMFLSC ALFFVGTKIY VRFVPKGSPL SSVAQVLVAA FKKRHLQLPE QPCFSLFNYV PSNSLNSILP YTNQFRFLSK AAVKTPEDHI
301: NSSDGSAVDP WRLCSIQQVE EVKCLLRVMP IWVAGTIYYV SVVQSQNYVI FQALQSDNQL GHINFHIPPA SFIVISMLSI TIWLPIYDRV LLPWLRKFTG
401: KEDGITLLQK MGIGIFLSIV TMIISGIVED KRRTLAMTKP MLQMTQGKGA ISSMSGLWLI PQMALSGLSE AFTLISENEF FYKQCPENMR SIAASFFFVG
501: MAGSSYLSSF LTSVVHKTSN WLAEDLNKGK LDSFYYLIAA LEILNLGYFL VCAKWYKYKG RAGDNKVSER TDQDEIVI
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.