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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 5
  • vacuole 3
  • extracellular 2
  • endoplasmic reticulum 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g075440.1.1 Tomato plasma membrane 93.68 89.27
PGSC0003DMT400065303 Potato plasma membrane 58.3 56.08
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 22.53 54.55
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 21.15 51.44
PGSC0003DMT400019424 Potato mitochondrion 32.41 48.81
PGSC0003DMT400019420 Potato plasma membrane 51.58 47.8
VIT_06s0004g03520.t01 Wine grape plasma membrane 52.77 46.27
VIT_06s0004g03530.t01 Wine grape plasma membrane 52.57 46.1
PGSC0003DMT400016889 Potato plasma membrane 50.2 46.01
PGSC0003DMT400019426 Potato plasma membrane 50.0 45.75
KRH22952 Soybean plasma membrane 45.85 42.88
AT3G45680.1 Thale cress plasma membrane 46.84 42.47
Os05t0338900-00 Rice plasma membrane 17.19 42.44
PGSC0003DMT400065310 Potato plasma membrane 46.05 41.98
CDX86031 Canola plasma membrane 12.85 41.94
CDY18499 Canola plasma membrane 46.05 41.83
AT3G45700.1 Thale cress plasma membrane 45.06 41.61
Bra021295.1-P Field mustard plasma membrane 45.65 41.47
CDX99152 Canola plasma membrane 45.06 40.93
AT3G45690.1 Thale cress plasma membrane 41.5 40.7
CDY12696 Canola plasma membrane 41.3 40.43
Bra033955.1-P Field mustard plasma membrane 43.48 40.07
CDX81495 Canola plasma membrane 40.71 39.69
AT3G45650.2 Thale cress plasma membrane 45.65 39.55
GSMUA_Achr6P15780_001 Banana plasma membrane 38.93 39.48
AT3G45660.2 Thale cress plasma membrane 45.06 39.45
TraesCS4A01G440400.1 Wheat plasma membrane 42.89 39.38
TraesCS7D01G049300.1 Wheat plasma membrane 42.89 39.38
TraesCS4A01G440300.1 Wheat plasma membrane 42.69 39.2
TraesCS4A01G440600.1 Wheat plasma membrane 42.69 39.2
AT3G45720.1 Thale cress plasma membrane 42.89 39.1
Bra033836.1-P Field mustard plasma membrane 40.32 39.08
TraesCS7A01G054000.2 Wheat plasma membrane 42.49 39.02
AT3G45710.1 Thale cress plasma membrane 42.89 38.75
TraesCS4A01G440500.1 Wheat plasma membrane 42.09 38.66
CDY48147 Canola plasma membrane 42.09 38.66
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 43.08 38.38
TraesCS4A01G440700.1 Wheat plasma membrane 42.09 38.1
CDX99151 Canola plasma membrane 41.7 38.02
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 42.29 37.61
GSMUA_Achr10P... Banana plasma membrane 35.38 37.53
TraesCS7A01G054100.1 Wheat plasma membrane 41.5 37.43
TraesCS5D01G158500.1 Wheat plasma membrane 42.29 37.41
TraesCS7D01G119800.1 Wheat plasma membrane 41.11 37.41
TraesCS7B01G020500.1 Wheat plasma membrane 41.9 37.32
TraesCS7D01G119900.1 Wheat plasma membrane 41.7 37.15
TraesCS7D01G049400.1 Wheat plasma membrane 41.11 37.14
TraesCS5B01G152000.1 Wheat plasma membrane 41.7 37.08
HORVU7Hr1G025680.3 Barley plasma membrane 41.5 36.84
HORVU7Hr1G025670.1 Barley plasma membrane 40.91 36.51
TraesCS5A01G153200.1 Wheat plasma membrane 42.09 36.47
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 41.7 36.44
CDX86030 Canola plasma membrane 19.17 35.66
TraesCS7B01G020300.1 Wheat plasma membrane 41.11 34.96
HORVU5Hr1G047970.5 Barley mitochondrion 41.3 34.78
TraesCS7A01G121600.1 Wheat plastid 36.76 33.63
PGSC0003DMT400010578 Potato plasma membrane 28.66 33.1
PGSC0003DMT400074797 Potato plasma membrane 33.79 32.26
PGSC0003DMT400006545 Potato plasma membrane 29.64 32.12
PGSC0003DMT400016891 Potato plasma membrane 29.25 31.03
PGSC0003DMT400000812 Potato plasma membrane, plastid 34.59 30.92
PGSC0003DMT400037693 Potato plasma membrane 34.98 30.52
PGSC0003DMT400010582 Potato plasma membrane 32.61 29.89
PGSC0003DMT400065197 Potato mitochondrion 34.39 29.74
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 22.53 29.38
PGSC0003DMT400069660 Potato plasma membrane 33.2 29.07
PGSC0003DMT400040282 Potato plasma membrane 33.0 28.84
PGSC0003DMT400004850 Potato plasma membrane 32.61 28.8
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 34.39 28.71
PGSC0003DMT400065196 Potato plasma membrane 32.81 28.09
PGSC0003DMT400075590 Potato plasma membrane 31.42 27.6
PGSC0003DMT400040284 Potato plasma membrane 31.82 27.52
PGSC0003DMT400065326 Potato plasma membrane 33.0 27.33
PGSC0003DMT400040275 Potato plasma membrane 32.02 27.18
PGSC0003DMT400040231 Potato plasma membrane 31.42 27.13
PGSC0003DMT400040285 Potato plasma membrane 30.83 26.67
PGSC0003DMT400068025 Potato plasma membrane 31.42 26.54
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 30.43 25.88
PGSC0003DMT400040277 Potato cytosol, nucleus, plasma membrane 17.39 22.06
Bra038280.1-P Field mustard plasma membrane 41.5 18.8
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
UniProt:M1AC21InterPro:MFS_trans_sfPFAM:PF00854EnsemblPlantsGene:PGSC0003DMG400007508PGSC:PGSC0003DMG400007508EnsemblPlants:PGSC0003DMT400019419
InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF19InterPro:PTR2_symporter_CSSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI0002963803SEG:seg:::
Description
Major Facilitator Superfamily protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007508]
Coordinates
chr6:-:55971792..55976592
Molecular Weight (calculated)
55846.3 Da
IEP (calculated)
8.771
GRAVY (calculated)
0.407
Length
506 amino acids
Sequence
(BLAST)
001: MNSVSAAKVY NMANGCSTIF PILGAVVADS FLGCFSVIWI SSFISLLGVL LLTFTAVIDT LRPPKCFDGS NECRNASTFH LTILYAALAL AYLGNGGTRF
101: TIGSMGANQF HKPNHQAIFF NWYTFALYTS NVIGSTVLLY IEDNVSWVLG FAICVAFNIL GLAIFLSGRC FYRHIEAQQE SPFMSLARVA VAAIRKHREP
201: LSLGGEDYYH GMTKQDSATS AHDLTNPSKF FRFLNRAALI TEGDKKPERV AAEPWRLCTV QQVEDLKILI KLFPIWTTGL LLCTPLVIQT SLAILQALKM
301: DRHLGSNFKI PAGSVIVFTM ISTCITITFM DRVLSPLLTK RIRTSLTPLQ RVGIGHVLTV VSMVLSALVE SKRIKLDKSH HQNSVVVPMS VFWLAPQLAI
401: SGIGLAFHSP GYVGFYYQEF PGSLKSTSTA VVAVFMGVAF YLGNGVMDLV QKVTGWLPEN INNGRLDNVF WVISVLGALN FVYYVVCASL YEYKNVDKEV
501: NDSIDK
Best Arabidopsis Sequence Match ( AT3G45650.1 )
(BLAST)
001: MASSVTGDAE TAISADSSTK RRGGGWITFP FMIATLLGLT IAAWGWLLNL IVYLIEEFNV KSIAAAQIAN IVSGCICMVP AVAAIASDSF FGTIPVISVS
101: AFISLMGVAL LTLTASLDTL RPRPCETASI LCQSPSKTQL GVLYTAITLA SIGTGGTRFT LATAGANQYE KTKDQGSFFN WFFFTTYLAG AISATAIVYT
201: EDNISWTLGF GLSVAANFFS FLVFVSGKRF YKHDKPLGSP FTSLLCVIFA ALRKRKAVVS TNEKDYHNES ITMPTKSFRF FNRAALKQED EVKPDGTIRN
301: PWRLCSVQQV EDFKAVIRII PLALATIFLS TPIAMQLSLT VLQGLVMDRR LGPSFKIPAG SLQVITLLST CLFIIVNDRV LYPFYQKLTG KHLTPLQRVG
401: IGHAFNILSM AVTAIVEAKR LKIVQKGHFL GSSSVADMSV LWLFPPLVIV GIGEAFHFPG NVALCYQEFP ESMRSTATSI TSVVIGICFY TSTALIDLIQ
501: RTTAWLPDDI NHGRVDNVYW ILVIGGVLNL GYFLVCSWLY RYRNLKDDDH KQAANVSH
Arabidopsis Description
NAXT1Nitrate excretion transporter1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.