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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • plastid 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g044310.1.1 Tomato plasma membrane 93.16 88.71
PGSC0003DMT400006545 Potato plasma membrane 50.92 65.31
VIT_09s0002g04130.t01 Wine grape plasma membrane 61.27 59.0
KRH09892 Soybean cytosol, peroxisome, plasma membrane 54.92 54.74
KRH44330 Soybean plasma membrane 53.59 54.68
KRH47260 Soybean plasma membrane 54.42 53.8
KRH47259 Soybean plasma membrane 54.76 53.68
CDY70561 Canola plasma membrane 48.58 53.49
CDY69519 Canola plasma membrane 26.04 53.42
CDY69522 Canola plasma membrane 26.04 53.42
Bra033884.1-P Field mustard plasma membrane 22.2 53.41
Bra018952.1-P Field mustard plasma membrane 53.76 53.14
CDY30141 Canola plasma membrane 52.42 52.95
CDX97728 Canola plasma membrane 51.92 52.45
Bra027185.1-P Field mustard plasma membrane 51.92 52.45
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 53.09 52.39
CDY28371 Canola plasma membrane 42.24 52.06
CDY51257 Canola plastid 42.07 51.85
AT3G16180.1 Thale cress plasma membrane 50.92 51.61
KRH44331 Soybean cytosol, peroxisome, plasma membrane 52.09 51.4
KRH09893 Soybean cytosol, peroxisome, plasma membrane 52.59 51.14
CDY20187 Canola plasma membrane 24.37 49.66
PGSC0003DMT400075590 Potato plasma membrane 46.91 48.78
PGSC0003DMT400000812 Potato plasma membrane, plastid 44.74 47.35
PGSC0003DMT400010578 Potato plasma membrane 34.22 46.8
PGSC0003DMT400074797 Potato plasma membrane 40.9 46.23
PGSC0003DMT400004850 Potato plasma membrane 42.07 43.98
PGSC0003DMT400040282 Potato plasma membrane 42.4 43.87
PGSC0003DMT400040284 Potato plasma membrane 42.4 43.42
PGSC0003DMT400010582 Potato plasma membrane 39.57 42.93
PGSC0003DMT400040285 Potato plasma membrane 41.07 42.05
PGSC0003DMT400040231 Potato plasma membrane 41.07 41.98
PGSC0003DMT400040275 Potato plasma membrane 41.57 41.78
PGSC0003DMT400037693 Potato plasma membrane 37.56 38.79
PGSC0003DMT400040277 Potato cytosol, nucleus, plasma membrane 24.54 36.84
PGSC0003DMT400065196 Potato plasma membrane 35.39 35.87
Bra021168.1-P Field mustard plasma membrane 51.59 35.48
PGSC0003DMT400069660 Potato plasma membrane 34.22 35.47
PGSC0003DMT400065197 Potato mitochondrion 33.89 34.7
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 34.22 33.83
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 11.35 32.69
PGSC0003DMT400065303 Potato plasma membrane 28.55 32.51
PGSC0003DMT400019426 Potato plasma membrane 29.88 32.37
PGSC0003DMT400016889 Potato plasma membrane 29.55 32.07
PGSC0003DMT400065326 Potato plasma membrane 32.55 31.91
PGSC0003DMT400019420 Potato plasma membrane 28.71 31.5
PGSC0003DMT400019419 Potato plasma membrane 26.54 31.42
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 10.85 31.1
PGSC0003DMT400065200 Potato cytosol, peroxisome, plasma membrane 29.72 29.92
PGSC0003DMT400019424 Potato mitochondrion 16.69 29.76
PGSC0003DMT400065310 Potato plasma membrane 27.55 29.73
PGSC0003DMT400016891 Potato plasma membrane 16.03 20.13
Protein Annotations
Gene3D:1.20.1250.20EntrezGene:102593188MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006857GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:IPR020846UniProt:M1CIA7InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
EnsemblPlantsGene:PGSC0003DMG400026455PGSC:PGSC0003DMG400026455EnsemblPlants:PGSC0003DMT400068025InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654
PANTHER:PTHR11654:SF157InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0002959010RefSeq:XP_006359461.1
Description
Nitrate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400026455]
Coordinates
chr12:-:50643015..50647292
Molecular Weight (calculated)
66551.7 Da
IEP (calculated)
8.963
GRAVY (calculated)
0.292
Length
599 amino acids
Sequence
(BLAST)
001: MELSTINSPK THHNKLISSD DPSPPTTTLL LQRSKGGLVT MPFIIANEAL ERVATFGVLP NMTFYLMKEY SMGVTNAQNL LFYWSSATNF LPLIGAFIAD
101: SYLGRFLTIG FGSIFSFLGT IVLWLTAMIP KARPPPCNLL VSGQACKSAT TAQYTILISS FMLMSIGAGG IRPCSLAFGA NQFDKRDTNG NIKRVLETYF
201: NWYYAAVMIS VLIAMTGIVY LQDHMGWKIG FGVPVVIMFF SAFLFFLATP LYIKENVINN LLGRFVQVIV VAYKNRKLAY PEQNSGYHYN KGSEFIVPTS
301: KLRFLNKACI IKSSEDGVAV DSWSLCTVEQ VEELKSLVRV MPLWSTGIMV SINLSQSSFP LLQAKSMDRH ITKRVEIPAA SFGIFTVIAL TVWLVVYDRV
401: IIPLGSRIRG KPFRIGTKER MGIGIFFSCM AMLLSGIIEH IRRRKSIDQG LLNNPEGVVA MSAMWLVPQH CLNGIAEAFN AIGQIEFYYS ELPKSMSSIA
501: TAMFGLGTAV ANLLASVILS NVDSITKREG KESWVSSNIN RGHYENYYWL LAIMTCFNLV YFMVCSWAYG PCVESGSKKL VEEDGEMELE NVSRPGSTT
Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.