Factsheet for Bra021168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033884.1-P	Field mustard	plasma membrane	28.59	100.0
CDY20187	Canola	plasma membrane	33.41	98.98
Bra027185.1-P	Field mustard	plasma membrane	62.46	91.74
AT3G16180.1	Thale cress	plasma membrane	59.93	88.32
Bra018952.1-P	Field mustard	plasma membrane	51.89	74.59
VIT_09s0002g04130.t01	Wine grape	plasma membrane	42.82	59.97
KRH44330	Soybean	plasma membrane	38.35	56.9
PGSC0003DMT400006545	Potato	plasma membrane	30.08	56.1
KRH47259	Soybean	plasma membrane	38.0	54.17
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	37.2	53.91
KRH47260	Soybean	plasma membrane	37.43	53.8
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	37.89	53.57
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	36.97	53.05
Solyc03g120560.2.1	Tomato	plasma membrane	36.05	52.07
PGSC0003DMT400068025	Potato	plasma membrane	35.48	51.59
Solyc03g120550.2.1	Tomato	plasma membrane	37.2	50.62
Solyc12g044310.1.1	Tomato	plasma membrane	36.17	50.08
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.06	38.34
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.37	37.08
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.14	37.06
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	23.54	36.09
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.57	35.43
Bra016259.1-P	Field mustard	plastid	25.26	35.37
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	13.89	35.17
Bra038366.1-P	Field mustard	plasma membrane	18.48	34.7
Bra035886.1-P	Field mustard	plasma membrane	19.63	34.41
Bra020609.1-P	Field mustard	plasma membrane	22.5	34.27
Bra025695.1-P	Field mustard	plasma membrane	22.5	33.79
Bra009996.1-P	Field mustard	peroxisome	22.04	33.74
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.62	33.28
Bra016260.1-P	Field mustard	plasma membrane	20.78	32.85
Bra019521.1-P	Field mustard	plasma membrane	22.85	32.57
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.73	32.2
Bra010111.1-P	Field mustard	plasma membrane	22.62	32.19
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.62	32.03
Bra029248.1-P	Field mustard	plasma membrane	22.39	31.86
Bra035885.1-P	Field mustard	peroxisome	20.44	31.56
Bra021295.1-P	Field mustard	plasma membrane	19.98	31.24
Bra033955.1-P	Field mustard	plasma membrane	19.63	31.15
Bra033836.1-P	Field mustard	plasma membrane	17.11	28.54
Bra016534.1-P	Field mustard	plastid	22.5	18.99
Bra008953.1-P	Field mustard	plasma membrane	28.47	16.04
Bra038280.1-P	Field mustard	plasma membrane	18.71	14.59

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EnsemblPlantsGene:Bra021168	EnsemblPlants:Bra021168.1	EnsemblPlants:Bra021168.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	UniProt:M4DXC2	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI0002543BCD	:	:	:	:	:

Description

AT3G16180 (E=3e-292) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA01:+:23619573..23623865

Molecular Weight (calculated)

96305.8 Da

IEP (calculated)

9.045

GRAVY (calculated)

0.285

Length

871 amino acids

Sequence
(BLAST)

001: MENPPDQTES KEMMLQPRIT RPKGGLLTMP FIIANEGFEK VASYGLLQNM ILYLMSDYGL GLVKGQNVLF MWVAATNFMP LVGAFLSDSY LGRFLTISIA
101: SLSSFLGMMV LWLTAMLPQV KPSPCVASTV TKCSSTEATS SQLALLYFAF ALISIGSGGI RPCSLAFGAD QLDNKENPKN ERVLESFFGW YYASSSVAVL
201: IAFTVIVYIQ DHLGWRIGFG VPAILMLLAS IVFVFASPLY VKRKATKSLF TGLAQVAVAA YVNRNLVLPV HNDSYGCYYH LNDSELKAPS DKLRFLNKAC
301: VIRNREEDIG ADGLALNPWR LCTTDQVEEL KALVKVIPVW STGIMMSINV SQNSFQLLQA NSMDRRLSDH STFKIPPGSF GMFTIIALIA WVVLYDRAIL
401: PLASKIRGKP VRINVKIRMG LGLFISFLAM AVSATVEHYR RRTAISQGLA NNATATVNIS AMWLVPQYGL HGLAEALTGI GQTEFFYTEF PKSMSSIAAA
501: LFGLGMAVAN ILASVILNVV KNSSKKGGES WIEDNINKGH YDYYYWVLAI LSFVNVIYYI VCSWSYGPTM DQFLNKACVI RNREEDIGAD GLALNPWRLC
601: TTDQVEELKA LVKVIPVWST GIMMSINVSQ NSFQLLQANS MDRRLSDHST FKIPPGSFGM FTIIALIAWV VLYDRAILPL ASKIRGKPVR INVKIRMGLG
701: LFISFLAMAV SATVEHYRRR TAISQGLANN ATATVNISAM WLVPQYGLHG LAEALTGIGQ TEFFYTEFPK SMSSIAAALF GLGMAVANIL ASVILNVVKN
801: SSKKGGESWI EDNINKGHYD YYYWVLAILS FVNVIYYIVC SWSYGPTMDQ LRNDKVNGVR GEEQEEAVKL N

Best Arabidopsis Sequence Match ( AT3G16180.1 )
(BLAST)

001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N

Arabidopsis Description

NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.