CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	91.75	91.6
KRH44330	Soybean	plasma membrane	74.59	77.0
KRH47259	Soybean	plasma membrane	76.57	75.94
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	72.61	71.43
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	60.07	60.57
VIT_09s0002g04130.t01	Wine grape	plasma membrane	60.56	59.0
Bra033884.1-P	Field mustard	plasma membrane	22.61	55.02
Bra027185.1-P	Field mustard	plasma membrane	53.47	54.64
AT3G16180.1	Thale cress	plasma membrane	53.14	54.48
PGSC0003DMT400068025	Potato	plasma membrane	53.8	54.42
PGSC0003DMT400006545	Potato	plasma membrane	41.58	53.96
AT1G52190.1	Thale cress	cytosol, peroxisome, plasma membrane	53.8	53.71
Bra018952.1-P	Field mustard	plasma membrane	52.81	52.81
Solyc12g044310.1.1	Tomato	plasma membrane	53.96	51.99
KRH62051	Soybean	plasma membrane	47.36	50.53
KRH60261	Soybean	plasma membrane	46.7	49.39
Solyc03g120560.2.1	Tomato	plasma membrane	48.68	48.92
Solyc03g120550.2.1	Tomato	plasma membrane	50.66	47.97
KRH41549	Soybean	plasma membrane	44.72	46.8
KRH04819	Soybean	plasma membrane	42.74	44.89
KRH16178	Soybean	plasma membrane	41.91	43.42
KRH04899	Soybean	cytosol, peroxisome, plasma membrane	37.62	41.45
KRH75378	Soybean	plasma membrane	37.79	39.76
KRH75379	Soybean	plasma membrane	30.69	38.75
Bra021168.1-P	Field mustard	plasma membrane	53.8	37.43
KRH56970	Soybean	cytosol, peroxisome, plasma membrane	36.14	36.68
KRH03408	Soybean	cytosol, peroxisome, plasma membrane	35.81	36.66
KRH03412	Soybean	plasma membrane	33.66	34.81
KRH03409	Soybean	plasma membrane	35.15	34.8
KRH56968	Soybean	plasma membrane	34.16	34.73
KRH56969	Soybean	plasma membrane	34.98	34.7
KRG95048	Soybean	cytosol, nucleus, plasma membrane	34.65	34.43
KRH66693	Soybean	mitochondrion	34.65	34.43
KRH22952	Soybean	plasma membrane	30.53	34.2
KRH66698	Soybean	plasma membrane	30.03	34.02
KRH74756	Soybean	plastid	34.32	33.55
KRH69380	Soybean	plastid	34.32	33.07
KRG99182	Soybean	plasma membrane	30.69	32.4
KRH56967	Soybean	peroxisome	31.52	31.99
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	32.34	31.87
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	32.34	31.51
KRH00056	Soybean	cytosol, peroxisome, plasma membrane	29.54	30.76
CDY68532	Canola	cytosol	0.83	0.93

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100805115	MapMan:24.2.2.9	EMBL:ACUP02004143	EnsemblPlantsGene:GLYMA_07G018800	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:I1KGM3	InterPro:IPR020846	EnsemblPlants:KRH47260	ProteinID:KRH47260
ProteinID:KRH47260.1	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654
PANTHER:PTHR11654:SF157	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002337F04	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:1498268..1502942

Molecular Weight (calculated)

66459.2 Da

IEP (calculated)

9.244

GRAVY (calculated)

0.249

Length

606 amino acids

Sequence
(BLAST)

001: MEKEVEFCSS ELEMASQHIP QPQRKKGGIV TMPFIIANEA LASVAKIGLL PNMILYLMGS YKFHLAKATQ VLLLSSATSN LTPLIGAFIA DSCLGRFLSV
101: GFGSSISFLG MALLCLTAII PQARPPPCNP ATERCKPATA GQMTMLISSF ALMSIGNGGL SCSIAFGADQ VNKKDNPNNQ RALETFFSWY YASTAFSVII
201: ALTVIVYIQD HFGWKVGFGV PAALMFMSTF FFFLASPLYV KNKVQGSLIT GLAQVIVVAY KNRKLPLPPR NSAAMYHRRK DSDLVVPTDK LRFLNKACIT
301: KDPEKDIASD GSASNPWSLC TIDRVEELKA IIKVIPLWST GIMVSVNIGG SFGLLQAKSL NRHITSHFEI PAGSFAVVIV FIIFIWVALY DRVIIPIASK
401: LRGKPVRISA KRRMGIGLVF SFLHLATAAI VENERRRRAI REGHINDTHA VLNMSAMWLV PQLCLSGMAE AFNAIGQNEF YYTEFPRTMS SIAACLFGLG
501: MAAGNVLSSL IFSIVENATS RGGNEGWVLD NINKGRYDRY YWVLASLSAV NILYYLVCSW AYGPTVDQLF KVSDENSSNE KEFTQLGNMG QVDVSEGIGS
601: NEKRVN

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.