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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97728 Canola plasma membrane 99.16 99.16
CDY30141 Canola plasma membrane 98.48 98.48
Bra033884.1-P Field mustard plasma membrane 38.95 92.77
AT3G16180.1 Thale cress plasma membrane 88.7 89.0
Bra018952.1-P Field mustard plasma membrane 77.74 76.07
Bra021168.1-P Field mustard plasma membrane 91.74 62.46
VIT_09s0002g04130.t01 Wine grape plasma membrane 62.06 59.16
KRH44330 Soybean plasma membrane 55.65 56.22
PGSC0003DMT400006545 Potato plasma membrane 44.01 55.89
KRH47259 Soybean plasma membrane 55.48 53.85
KRH47260 Soybean plasma membrane 54.64 53.47
KRH09893 Soybean cytosol, peroxisome, plasma membrane 55.14 53.08
KRH09892 Soybean cytosol, peroxisome, plasma membrane 53.79 53.08
KRH44331 Soybean cytosol, peroxisome, plasma membrane 54.3 53.05
PGSC0003DMT400068025 Potato plasma membrane 52.45 51.92
Solyc03g120560.2.1 Tomato plasma membrane 52.28 51.41
Solyc12g044310.1.1 Tomato plasma membrane 53.12 50.08
Solyc03g120550.2.1 Tomato plasma membrane 53.79 49.84
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 38.62 38.68
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 37.27 37.08
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 36.42 36.55
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 36.59 35.93
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 34.06 35.56
Bra038366.1-P Field mustard plasma membrane 27.82 35.56
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 20.4 35.17
Bra020609.1-P Field mustard plasma membrane 33.56 34.79
Bra016259.1-P Field mustard plastid 36.42 34.73
Bra025695.1-P Field mustard plasma membrane 33.73 34.48
Bra035886.1-P Field mustard plasma membrane 28.84 34.41
Bra009996.1-P Field mustard peroxisome 32.88 34.27
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 33.73 33.78
Bra016260.1-P Field mustard plasma membrane 30.02 32.3
Bra019521.1-P Field mustard plasma membrane 33.22 32.24
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 33.22 32.03
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 32.72 31.54
Bra010111.1-P Field mustard plasma membrane 32.55 31.54
Bra035885.1-P Field mustard peroxisome 29.85 31.38
Bra029248.1-P Field mustard plasma membrane 32.21 31.21
Bra021295.1-P Field mustard plasma membrane 29.17 31.06
Bra033955.1-P Field mustard plasma membrane 28.67 30.97
Bra033836.1-P Field mustard plasma membrane 25.3 28.74
Bra016534.1-P Field mustard plastid 33.73 19.38
Bra008953.1-P Field mustard plasma membrane 41.32 15.85
Bra038280.1-P Field mustard plasma membrane 27.49 14.59
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EnsemblPlantsGene:Bra027185EnsemblPlants:Bra027185.1EnsemblPlants:Bra027185.1-PGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:M4EEH3InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF157SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI000254783ESEG:seg::::
Description
AT3G16180 (E=1e-297) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA05:+:19580376..19584383
Molecular Weight (calculated)
65209.7 Da
IEP (calculated)
8.993
GRAVY (calculated)
0.277
Length
593 amino acids
Sequence
(BLAST)
001: MENPPDQTES KEMMLPPRTR RPKGGLLTMP FIIANEGFEK VASYGLLQNM ILYLMSDYGL GVVKGQTVLF MWVAATNFMP LVGAFLSDSY LGRFFTIAIA
101: SLSSFLGMVL LWLTAMLPQV KPSPCIASAG TNCSSPAATS SQLALLYSAF ALISIGSGGI RPCSLAFGAD QLDNKENPKN ERVLESFFGW YHASSSVAVL
201: IAFTVIVYIQ DHLGWRIGFG IPAILMLLAS IVFVFASPLY VKRNVTKSLF TGLAQAAVAA YVNRKLMLPG QSDSYGCYHH LKDSELKAPS DKLRFLNKAC
301: VIKNRDEDIG SDGLALNPWR LCTTDQVEEL KALVKVIPVW STGIMMSINV SQNSFQLLQA NSMDRRLSND STFKIPAGSF GMFTIIALIS WVVLYDRAIL
401: PLASKIRGRP VRINVKIRMG LGLFISFLAM AVSATVEHYR RRTAISQGLR DNATATVNIS AMWLVPQYVL HGLAEALTGI GQTEFFYTEF PKSMSSIAAA
501: LFGLGMAVAN ILASVILNVV KNSSKKGGVS WIEDNINKGH YDYYYWVLAI MSFVNVIYYV ACSWSYGPTV DQVRNDKVNG VGEEEQEEVV KIN
Best Arabidopsis Sequence Match ( AT3G16180.1 )
(BLAST)
001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N
Arabidopsis Description
NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.