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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027185.1-P Field mustard plasma membrane 99.16 99.16
CDY30141 Canola plasma membrane 98.65 98.65
CDY70561 Canola plasma membrane 84.49 92.1
CDY20187 Canola plasma membrane 45.03 90.82
CDY28371 Canola plasma membrane 74.2 90.53
AT3G16180.1 Thale cress plasma membrane 88.87 89.17
CDY51257 Canola plastid 72.68 88.68
CDY69519 Canola plasma membrane 39.12 79.45
CDY69522 Canola plasma membrane 38.95 79.11
VIT_09s0002g04130.t01 Wine grape plasma membrane 62.73 59.81
PGSC0003DMT400006545 Potato plasma membrane 44.01 55.89
PGSC0003DMT400068025 Potato plasma membrane 52.45 51.92
Solyc03g120560.2.1 Tomato plasma membrane 52.61 51.74
Solyc03g120550.2.1 Tomato plasma membrane 54.47 50.47
Solyc12g044310.1.1 Tomato plasma membrane 53.12 50.08
CDY67993 Canola plasma membrane 40.64 43.35
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 24.96 42.53
CDY65728 Canola cytosol 14.0 41.71
CDY69402 Canola plasma membrane 19.73 39.26
CDY38595 Canola cytosol, peroxisome, plasma membrane 38.45 38.51
CDY07377 Canola cytosol, peroxisome, plasma membrane 37.61 37.42
CDY04237 Canola cytosol, peroxisome, plasma membrane 37.27 37.14
CDY56086 Canola cytosol, peroxisome, plasma membrane 36.59 36.72
CDY40280 Canola plasma membrane 35.08 36.62
CDY23545 Canola cytosol, peroxisome, plasma membrane 37.27 36.41
CDY28441 Canola cytosol, peroxisome, plasma membrane 34.74 36.27
CDY53067 Canola cytosol, peroxisome, plasma membrane 36.26 36.2
CDY25813 Canola cytosol, peroxisome, plasma membrane 34.23 35.74
CDY48389 Canola cytosol, peroxisome, plasma membrane 36.42 35.58
CDY54537 Canola cytosol, peroxisome, plasma membrane 36.76 35.28
CDY11647 Canola plastid 36.76 35.22
CDY52504 Canola plasma membrane 33.73 34.97
CDY09846 Canola plasma membrane 25.3 34.97
CDY38767 Canola plastid 36.59 34.89
CDY05592 Canola plasma membrane 33.56 34.79
CDY52480 Canola plasma membrane 26.81 34.49
CDY26715 Canola plasma membrane 33.73 34.48
CDX86198 Canola peroxisome 33.05 34.45
CDX83801 Canola cytosol, peroxisome, plasma membrane 34.06 34.18
CDX81902 Canola cytosol, peroxisome, plasma membrane 33.73 33.78
CDY21692 Canola plasma membrane 32.21 33.28
CDY11648 Canola plasma membrane 30.19 32.49
CDY45756 Canola plasma membrane 31.2 32.4
CDY38766 Canola plasma membrane 30.02 32.3
CDY51783 Canola cytosol, peroxisome, plasma membrane 32.72 32.17
CDY36913 Canola cytosol, peroxisome, plasma membrane 33.22 32.03
CDX86030 Canola plasma membrane 14.67 31.99
CDX96690 Canola plasma membrane 32.72 31.96
CDX68450 Canola cytosol, peroxisome, plasma membrane 33.05 31.87
CDY30731 Canola plasma membrane 32.04 31.72
CDY00315 Canola plasma membrane 32.55 31.54
CDY12696 Canola plasma membrane 27.49 31.53
CDX81495 Canola plasma membrane 27.49 31.41
CDX84344 Canola plasma membrane 31.87 31.4
CDX87266 Canola peroxisome 30.19 31.24
CDY18499 Canola plasma membrane 29.34 31.24
CDY16763 Canola peroxisome 30.19 31.18
CDY45754 Canola plasma membrane 31.53 31.06
CDX83027 Canola cytosol, peroxisome, plasma membrane 31.53 31.06
CDY69433 Canola golgi, peroxisome, plastid 33.05 30.91
CDY21805 Canola cytosol, peroxisome, plasma membrane 32.21 30.76
CDX99152 Canola plasma membrane 28.67 30.52
CDY48147 Canola plasma membrane 27.82 29.95
CDX99151 Canola plasma membrane 27.82 29.73
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 28.33 28.33
CDX96007 Canola cytosol, peroxisome, plasma membrane 32.88 28.18
CDX86031 Canola plasma membrane 7.08 27.1
CDX69747 Canola plasma membrane 41.48 15.91
CDY68532 Canola cytosol 0.67 0.75
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078EED7EnsemblPlants:CDX97728ProteinID:CDX97728ProteinID:CDX97728.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00104983001InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF157SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EDCB1FSEG:seg::::
Description
BnaA05g23510D
Coordinates
chrLK031900:-:1224650..1228523
Molecular Weight (calculated)
65202.7 Da
IEP (calculated)
8.985
GRAVY (calculated)
0.287
Length
593 amino acids
Sequence
(BLAST)
001: MENPPDQTES KEMMLPPRTR RPKGGLITMP FIIANEGFEK VASYGLLQNM ILYLMSDYGL GVVKGQTVLF MWVAATNFMP LVGAFLSDSY LGRFLTIAIA
101: SLSSFLGMVL LWLTAMLPQV KPSPCIASAG TNCSSPAATS SQLALLYSAF ALISIGSGGI RPCSLAFGAD QLDNKENPKN ERVLESFFGW YYASSSVAVL
201: IAFTVIVYIQ DHLGWRIGFG IPAILMLLAS IVFVFASPLY VKRSVTKSLF TGLAQAAVAA YVNRKLMLPG QSDSYGCYHH LKDSELKAPS DKLRFLNKAC
301: VIRNRDEDIG SDGLALNPWR LCTTDQVEEL KALVKVIPVW STGIMMSINV SQNSFQLLQA NSMDRRLSND STFKIPAGSF GMFTIIALIS WVVLYDRAIL
401: PLASKIRGRP VRINVKIRMG LGLFISFLAM AVSATVEHYR RRTAISQGLR DNATATVNIS AMWLVPQYVL HGLAEALTGI GQTEFFYTEF PKSMSSIAAA
501: LFGLGMAVAN ILASVILNVV KNSSKKGGVS WIEDNINKGH YDYYYWVLAI MSFVNVIYYV ACSWSYGPTV DQVRNDKVNG VGEEEQEEVV KIN
Best Arabidopsis Sequence Match ( AT3G16180.1 )
(BLAST)
001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N
Arabidopsis Description
NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.