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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69402 Canola plasma membrane 47.41 98.32
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 94.34 96.52
Bra038366.1-P Field mustard plasma membrane 72.33 96.34
CDY38595 Canola cytosol, peroxisome, plasma membrane 87.38 91.22
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 87.54 90.77
CDY65728 Canola cytosol 29.13 90.45
CDY07377 Canola cytosol, peroxisome, plasma membrane 83.82 86.91
CDY04237 Canola cytosol, peroxisome, plasma membrane 80.58 83.7
KRH75378 Soybean plasma membrane 70.06 75.17
VIT_01s0011g03400.t01 Wine grape plasma membrane 66.99 71.01
KRH75379 Soybean plasma membrane 54.69 70.42
Solyc05g009500.2.1 Tomato plasma membrane 64.89 69.98
PGSC0003DMT400037693 Potato plasma membrane 64.56 68.79
GSMUA_Achr5P24480_001 Banana plasma membrane 62.46 66.1
CDX96007 Canola cytosol, peroxisome, plasma membrane 70.06 62.57
Os06t0264500-01 Rice extracellular 57.28 59.3
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 56.96 59.26
EER88193 Sorghum cytosol, golgi, peroxisome 56.8 58.99
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 58.58 58.58
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 58.09 58.56
HORVU7Hr1G042120.1 Barley cytosol 58.25 58.35
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 58.09 58.09
CDY69519 Canola plasma membrane 18.77 39.73
CDY69522 Canola plasma membrane 18.77 39.73
CDY20187 Canola plasma membrane 18.45 38.78
CDY56086 Canola cytosol, peroxisome, plasma membrane 36.41 38.07
CDY26715 Canola plasma membrane 35.44 37.76
CDY53067 Canola cytosol, peroxisome, plasma membrane 36.08 37.54
CDY09846 Canola plasma membrane 25.89 37.3
CDX97728 Canola plasma membrane 35.28 36.76
CDX81902 Canola cytosol, peroxisome, plasma membrane 35.11 36.66
CDY25813 Canola cytosol, peroxisome, plasma membrane 33.66 36.62
CDY40280 Canola plasma membrane 33.5 36.44
CDY30141 Canola plasma membrane 34.95 36.42
CDY21692 Canola plasma membrane 33.82 36.41
CDY23545 Canola cytosol, peroxisome, plasma membrane 35.76 36.41
CDX83801 Canola cytosol, peroxisome, plasma membrane 34.79 36.38
CDY48389 Canola cytosol, peroxisome, plasma membrane 35.6 36.24
CDY11647 Canola plastid 36.25 36.19
CDY38767 Canola plastid 36.25 36.01
CDY28441 Canola cytosol, peroxisome, plasma membrane 33.01 35.92
CDY70561 Canola plasma membrane 31.23 35.48
CDX86030 Canola plasma membrane 15.37 34.93
CDY45756 Canola plasma membrane 32.2 34.85
CDY28371 Canola plasma membrane 27.35 34.77
CDY51257 Canola plastid 27.02 34.36
CDY36913 Canola cytosol, peroxisome, plasma membrane 34.14 34.31
CDX96690 Canola plasma membrane 33.66 34.27
CDY51783 Canola cytosol, peroxisome, plasma membrane 33.33 34.16
CDY30731 Canola plasma membrane 33.01 34.06
CDY00315 Canola plasma membrane 33.33 33.66
CDX68450 Canola cytosol, peroxisome, plasma membrane 33.5 33.66
CDY45754 Canola plasma membrane 32.69 33.55
CDY52480 Canola plasma membrane 24.92 33.41
CDX84344 Canola plasma membrane 32.52 33.39
CDY16763 Canola peroxisome 30.91 33.28
CDX99152 Canola plasma membrane 29.94 33.21
CDY11648 Canola plasma membrane 29.61 33.21
CDY52504 Canola plasma membrane 30.58 33.04
CDY05592 Canola plasma membrane 30.58 33.04
CDY38766 Canola plasma membrane 29.29 32.85
CDX87266 Canola peroxisome 30.42 32.81
CDX83027 Canola cytosol, peroxisome, plasma membrane 31.88 32.72
CDX86198 Canola peroxisome 30.1 32.69
CDY12696 Canola plasma membrane 27.35 32.69
CDY69433 Canola golgi, peroxisome, plastid 33.33 32.49
CDX81495 Canola plasma membrane 27.18 32.37
CDY18499 Canola plasma membrane 29.13 32.32
CDX86031 Canola plasma membrane 8.09 32.26
CDY21805 Canola cytosol, peroxisome, plasma membrane 32.36 32.21
CDY48147 Canola plasma membrane 28.64 32.12
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 17.8 31.61
CDX99151 Canola plasma membrane 27.67 30.81
CDY67993 Canola plasma membrane 27.67 30.76
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 27.99 29.17
CDX69747 Canola plasma membrane 28.64 11.45
CDY68532 Canola cytosol 0.65 0.75
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078ITP3UniProt:A0A078ITP3EnsemblPlants:CDY54537ProteinID:CDY54537
ProteinID:CDY54537.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00014276001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EEF181SEG:seg::::
Description
BnaCnng27190DBnaCnng27190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITP3]
Coordinates
chrLK033328:-:23148..26983
Molecular Weight (calculated)
69194.6 Da
IEP (calculated)
9.108
GRAVY (calculated)
0.237
Length
618 amino acids
Sequence
(BLAST)
001: MEEKSKNKIS EEEKQFHGSS SRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFSGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE LCVVADTAQL GILYIALLLG ALGSGGIRPC VVAFGADQFD ESDPKQTTKT WNYFNGYYFC MGAANLVAVT
201: VLVYIQDNVG WGLGLGIPTV AMFLSVIAFV GGFRLYRHLI PSGSPFTRLI QVAVSAFRKR KLRMVSDPTL LYTNDEIDAP ISLGGNLTHT KHMSCHFYCF
301: WHILYSMLQK MDFYWTQFKN TAIVTDEDNL KSGQIPNLWK LNTVHRVEEL KSVIRMGPIG ASGILLITAY AQQGTFSLQQ AKTTNRHLTK SFQIPAGSMS
401: VFTTVAMLST IIFYDRFLVK IARKFTGLER GITFLHRMGV GFVISIIATL VAGFVEIKRK HVAIEHGLLD KPHTMVPISF LWLIPQYSLH GVAEAFMSIG
501: HLEFFYDQAP ESMRSTAMAL FWMAISIGNY VSTLLVTLVH KFSAKSDGSN WLPDNNLNRG KLEYFYWLIT LLQVVNLVYY LWCAKIYTYK PVQVYHSKEV
601: NSPFKDELEL FNRSLVDA
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.