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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029248.1-P Field mustard plasma membrane 99.67 97.55
CDY45756 Canola plasma membrane 91.49 95.97
CDY45754 Canola plasma membrane 96.16 95.68
CDX84344 Canola plasma membrane 93.32 92.86
CDY00315 Canola plasma membrane 94.66 92.65
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 92.32 89.77
CDY16763 Canola peroxisome 82.64 86.24
CDX87266 Canola peroxisome 82.47 86.21
CDY51783 Canola cytosol, peroxisome, plasma membrane 78.8 78.28
CDY36913 Canola cytosol, peroxisome, plasma membrane 80.3 78.21
CDY69433 Canola golgi, peroxisome, plastid 80.8 76.34
CDY21805 Canola cytosol, peroxisome, plasma membrane 78.8 76.01
CDX68450 Canola cytosol, peroxisome, plasma membrane 76.79 74.8
CDX83027 Canola cytosol, peroxisome, plasma membrane 74.79 74.42
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 69.62 70.32
CDY09846 Canola plasma membrane 46.08 64.34
CDY26715 Canola plasma membrane 61.1 63.1
CDX83801 Canola cytosol, peroxisome, plasma membrane 61.94 62.77
CDY21692 Canola plasma membrane 59.93 62.54
CDX81902 Canola cytosol, peroxisome, plasma membrane 61.44 62.16
CDX96690 Canola plasma membrane 60.6 59.8
KRH03408 Soybean cytosol, peroxisome, plasma membrane 57.26 57.94
Solyc03g113420.2.1 Tomato plasma membrane 56.76 57.92
PGSC0003DMT400065196 Potato plasma membrane 56.93 57.7
KRH56970 Soybean cytosol, peroxisome, plasma membrane 56.76 56.95
KRH56968 Soybean plasma membrane 54.59 54.87
KRH03412 Soybean plasma membrane 53.59 54.78
KRH56969 Soybean plasma membrane 55.76 54.66
KRH03409 Soybean plasma membrane 55.76 54.58
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 48.91 52.32
Os12t0638300-01 Rice extracellular, plasma membrane 49.42 50.43
GSMUA_Achr4P22320_001 Banana plasma membrane 42.4 50.2
Os03t0687000-02 Rice plasma membrane 48.75 49.74
GSMUA_Achr5P15030_001 Banana cytosol 39.23 49.58
Zm00001d013529_P002 Maize plasma membrane 48.91 49.58
TraesCS4D01G026800.1 Wheat golgi, unclear 49.08 49.33
TraesCS2A01G045500.1 Wheat plasma membrane 49.25 49.25
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 48.41 49.24
Zm00001d031213_P001 Maize plasma membrane 41.74 49.12
TraesCS4A01G283900.1 Wheat golgi, unclear 48.91 49.08
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 48.75 49.08
TraesCS2D01G044200.1 Wheat plasma membrane 48.91 48.91
EER91066 Sorghum cytosol, peroxisome, plasma membrane 48.41 48.9
TraesCS2B01G057700.1 Wheat plasma membrane 48.75 48.75
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 48.58 48.42
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 49.08 48.04
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 48.91 47.95
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 48.25 47.85
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 48.41 47.78
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 48.75 47.4
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 48.58 47.39
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 45.91 46.77
TraesCS2D01G044000.1 Wheat plasma membrane 46.91 46.68
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 46.74 46.28
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 47.58 46.12
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 46.74 45.6
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 44.74 45.12
EES16414 Sorghum cytosol, peroxisome, plasma membrane 44.91 45.06
EER98133 Sorghum plasma membrane 48.08 44.24
CDY56086 Canola cytosol, peroxisome, plasma membrane 43.41 43.99
CDY53067 Canola cytosol, peroxisome, plasma membrane 43.24 43.6
CDY23545 Canola cytosol, peroxisome, plasma membrane 43.74 43.16
CDY48389 Canola cytosol, peroxisome, plasma membrane 43.74 43.16
CDY40280 Canola plasma membrane 40.4 42.61
CDY38767 Canola plastid 43.91 42.28
CDY25813 Canola cytosol, peroxisome, plasma membrane 40.07 42.25
CDY11647 Canola plastid 43.57 42.16
CDY28441 Canola cytosol, peroxisome, plasma membrane 39.73 41.9
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 47.41 41.4
CDY38766 Canola plasma membrane 35.06 38.11
CDY11648 Canola plasma membrane 34.72 37.75
CDY52480 Canola plasma membrane 28.55 37.09
CDX86198 Canola peroxisome 34.22 36.03
CDY05592 Canola plasma membrane 33.56 35.14
CDY52504 Canola plasma membrane 33.56 35.14
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.72 35.14
CDY04237 Canola cytosol, peroxisome, plasma membrane 33.89 34.12
CDX99152 Canola plasma membrane 31.72 34.11
CDY69402 Canola plasma membrane 16.86 33.89
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.56 33.72
CDY20187 Canola plasma membrane 16.53 33.67
CDY48147 Canola plasma membrane 30.88 33.58
CDX86030 Canola plasma membrane 15.19 33.46
CDY69519 Canola plasma membrane 16.19 33.22
CDY69522 Canola plasma membrane 16.19 33.22
CDY65728 Canola cytosol 11.02 33.17
CDY54537 Canola cytosol, peroxisome, plasma membrane 34.06 33.01
CDY28371 Canola plasma membrane 26.54 32.72
CDY12696 Canola plasma membrane 28.05 32.5
CDY30141 Canola plasma membrane 32.05 32.38
CDX81495 Canola plasma membrane 28.05 32.37
CDY70561 Canola plasma membrane 29.38 32.35
CDY51257 Canola plastid 26.21 32.3
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.7 32.18
CDX97728 Canola plasma membrane 31.72 32.04
CDY18499 Canola plasma membrane 29.72 31.96
CDX86031 Canola plasma membrane 8.01 30.97
CDX99151 Canola plasma membrane 27.88 30.09
CDY67993 Canola plasma membrane 27.05 29.14
CDX96007 Canola cytosol, peroxisome, plasma membrane 29.88 25.87
CDX69747 Canola plasma membrane 28.05 10.87
CDY68532 Canola cytosol 0.33 0.37
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078GYZ9UniProt:A0A078GYZ9EnsemblPlants:CDY30731ProteinID:CDY30731
ProteinID:CDY30731.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00046079001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE973CSEG:seg::
Description
BnaA02g33530DBnaA02g33530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYZ9]
Coordinates
chrLK032258:-:371112..373563
Molecular Weight (calculated)
66312.0 Da
IEP (calculated)
8.973
GRAVY (calculated)
0.350
Length
599 amino acids
Sequence
(BLAST)
001: MERKPLEVES TDHQKPSSAV YDGSATAVDS VEEEVQETKL VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTAVFNMK SITAATIINA FSGTINFGTF
101: VAAFLCDTYF GRYKTLTVAV IACFLGSLVI LLTAAVPQLH PAPCGTALTC TGPSGGQIAF LLMGLAFLVV GAGGIRPCNL AFGADQFNPK SESGKRGIDS
201: FFNWYFFTFT FAQILSLTLV VYIQSNVSWT IGLTIPVVLM FLACVIFFAG DKLYVKIKAS GSPLASIAQV ITVAIKKRGL KAVKQPWVNL YNYYPLNYAN
301: SKLKYTDQFR FLDKAAILAP EDKLEADGKP TDPWKLCTMQ QVEEVKCIVR VLPIWFASSI YYLTITQQMT YPVFQALQSD RRLGSGGFVI PAATYVVFLM
401: TGMTVFIIIY DRVLVPTLRR ITGIDTGITL LQRIGTGIFF AFLSLVVSGF VEERRRTFAL TKPTLAMWLI PQLTLAGVAE AFGAIGQMEF YYKQFPENMR
501: SFAGSIFYVG GGVSSYLGSF LIATVHRTTQ NSAGGNWLAE DLNKGRLDLF YFMIAGILAV NFAYFLVMSR WYRYKGSDDE VTAYETNGDV IKQQDKNKV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.