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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016260.1-P Field mustard plasma membrane 99.46 99.46
CDY11648 Canola plasma membrane 98.55 98.55
AT1G69860.1 Thale cress plasma membrane 84.03 83.42
KRG99182 Soybean plasma membrane 48.46 46.52
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 48.82 44.32
CDY56086 Canola cytosol, peroxisome, plasma membrane 47.37 44.16
GSMUA_Achr4P17590_001 Banana plasma membrane 35.75 44.07
CDY53067 Canola cytosol, peroxisome, plasma membrane 47.19 43.77
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 47.73 43.4
CDY11647 Canola plastid 48.09 42.81
CDY23545 Canola cytosol, peroxisome, plasma membrane 46.82 42.5
CDY48389 Canola cytosol, peroxisome, plasma membrane 46.82 42.5
CDY38767 Canola plastid 47.91 42.44
CDY25813 Canola cytosol, peroxisome, plasma membrane 43.74 42.43
CDY28441 Canola cytosol, peroxisome, plasma membrane 43.19 41.9
CDY40280 Canola plasma membrane 43.19 41.9
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 36.66 41.56
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 41.2 39.89
Os01t0913300-01 Rice plasma membrane 43.38 39.83
HORVU3Hr1G092870.1 Barley plasma membrane 43.74 39.77
TraesCS3D01G414400.1 Wheat plasma membrane 43.38 39.64
TraesCS3B01G454100.1 Wheat plasma membrane 43.19 39.34
TraesCS3A01G418800.1 Wheat plasma membrane 43.92 38.91
TraesCS3B01G454000.1 Wheat plasma membrane 41.2 37.27
TraesCS3D01G414300.1 Wheat plasma membrane 40.83 37.07
TraesCS3A01G418700.1 Wheat plasma membrane 40.65 36.9
CDY26715 Canola plasma membrane 38.11 36.21
CDX83801 Canola cytosol, peroxisome, plasma membrane 38.66 36.04
CDY45756 Canola plasma membrane 37.21 35.9
CDY21692 Canola plasma membrane 37.39 35.89
CDX81902 Canola cytosol, peroxisome, plasma membrane 38.11 35.47
CDY30731 Canola plasma membrane 38.11 35.06
CDY09846 Canola plasma membrane 27.22 34.97
CDY00315 Canola plasma membrane 38.66 34.8
CDX84344 Canola plasma membrane 37.93 34.72
CDY51783 Canola cytosol, peroxisome, plasma membrane 37.75 34.49
CDY36913 Canola cytosol, peroxisome, plasma membrane 38.48 34.47
CDX96690 Canola plasma membrane 37.93 34.43
CDY45754 Canola plasma membrane 37.57 34.39
CDX68450 Canola cytosol, peroxisome, plasma membrane 38.29 34.31
CDX83027 Canola cytosol, peroxisome, plasma membrane 37.39 34.22
CDY65728 Canola cytosol 12.34 34.17
CDY20187 Canola plasma membrane 17.97 33.67
CDY16763 Canola peroxisome 35.03 33.62
CDY21805 Canola cytosol, peroxisome, plasma membrane 37.57 33.33
CDY69433 Canola golgi, peroxisome, plastid 38.29 33.28
CDX87266 Canola peroxisome 34.3 32.98
CDY69522 Canola plasma membrane 17.42 32.88
CDY69519 Canola plasma membrane 17.42 32.88
CDY52504 Canola plasma membrane 33.94 32.69
CDY05592 Canola plasma membrane 33.94 32.69
CDX86198 Canola peroxisome 33.03 31.99
EES13016 Sorghum cytosol, nucleus, plasma membrane 36.66 31.61
CDY69402 Canola plasma membrane 17.06 31.54
KXG37624 Sorghum plasma membrane 34.48 31.41
CDY52480 Canola plasma membrane 25.95 31.02
CDY38595 Canola cytosol, peroxisome, plasma membrane 33.21 30.91
CDY07377 Canola cytosol, peroxisome, plasma membrane 33.39 30.87
CDY67993 Canola plasma membrane 31.03 30.76
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 19.42 30.75
CDY70561 Canola plasma membrane 30.31 30.7
CDX86030 Canola plasma membrane 15.06 30.51
Os04t0660900-01 Rice plasma membrane, plastid 34.85 30.43
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 32.49 30.19
CDY04237 Canola cytosol, peroxisome, plasma membrane 32.49 30.08
CDY30141 Canola plasma membrane 32.3 30.02
CDX97728 Canola plasma membrane 32.3 30.02
CDX99152 Canola plasma membrane 30.13 29.8
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.85 29.29
CDY51257 Canola plastid 25.77 29.22
CDY28371 Canola plasma membrane 25.77 29.22
Zm00001d001976_P001 Maize plastid 35.39 29.1
CDY18499 Canola plasma membrane 29.04 28.73
CDY12696 Canola plasma membrane 25.77 27.47
CDY48147 Canola plasma membrane 27.4 27.4
CDX99151 Canola plasma membrane 27.4 27.21
CDX81495 Canola plasma membrane 25.59 27.17
CDX86031 Canola plasma membrane 7.44 26.45
CDX96007 Canola cytosol, peroxisome, plasma membrane 28.68 22.83
CDX69747 Canola plasma membrane 31.22 11.13
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078HMC8UniProt:A0A078HMC8EnsemblPlants:CDY38766ProteinID:CDY38766
ProteinID:CDY38766.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00066561001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE5FF6SEG:seg::
Description
BnaA07g28380DBnaA07g28380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMC8]
Coordinates
chrLK032432:+:100550..102845
Molecular Weight (calculated)
62069.7 Da
IEP (calculated)
8.025
GRAVY (calculated)
0.283
Length
551 amino acids
Sequence
(BLAST)
001: MDEEGTVSSD STMRRRKPLG WKAMPYILAN ETLERLASFG LTSNFMVYMV REYHMDQVQA AALINTWSAL TNFAPIIGAF ISDSCTGKFV TIVFGSISEL
101: LGMLVLTLTS LIPSLRPPPC TTDQIIGTCV RYSDQQLYVL LLGLFLLSVG TGGIRSCSIP FSLDQFDDST EEGREGSRSF FSWYYTTHTI VQLISMTLVL
201: YLQNNISWAL GFAIPTALNL FALVLLFVGV RFYVFIRPEG SVISGIFKVL VDAYKKRNAQ PPSEIEHYRP LLETSSQSNK LVLTDQFRFL NKAVIVMNND
301: EARNEEWKIC TMRQIEDIKS IISIIPIFAS SIIGFLAMNQ QHTFTVSQAL KMDLRFPGSS YLIPPASITV ISLLTIGIWL PFYETVLVRH IEYITKQEGG
401: ISLLQKVGIG NFFSILTMII SGILERERRD LSRAGVSRSV FWLAPQQVLM GFYEVFTIVG LTEFFNKQVP GNMRSIGNSL LYLGMSFASY LSSATVSTVH
501: SVTARGGRQS WLTDDIDTGK LDYFYYFIAA LSTLNLIFFL CCAQRYRYRN M
Best Arabidopsis Sequence Match ( AT1G69860.1 )
(BLAST)
001: MDNEKGTSSS DLTTRQRKPL GWKAMPYIIG NETLERLATF GLMANFMVYM VREYHMDQVQ AVTLINTWSA LTNFAPIIGA FISDSYTGKF NTIVFGSIAE
101: LLGMLVLTFT SLVPNLRPPP CTADQITGQC IPYSYSQLYV LLSGLFLLSV GTGGIRSCSV PFSLDQFDDS TEEGREGSRS FFSWYYTTHT IVQLVSMTLV
201: LYVQNNISWG IGFAIPTVLN FFALLLLFVG TRYYVFVKPE GSVFSGVFKV LVAAYKKRKA RFTSGIDYHQ PLLETDLQSN KLVLTDQFRF LNKAVIVMNN
301: DEAGNEEWRT CTVRQIEDIK SIISIIPIFA SSIIGFLAMN QQQTFTVSQA LKMDLQFPGT SYLIPPASIT VISLLNIGIW LPFYETVLVR HIENITKQNG
401: GISLLQKVGI GNIFSISTML ISGIVERKRR DLSLNGVKMS VFWLTPQQVL MGFYQVFTIV GLTEFFNKQV PINMRSIGNS LLYLGLSLAS YLSSAMVSIV
501: HSVTARGGQS WLTDDIDKSK LDCFYYFIAA LSTLNFIFFF WCARRYRYRN YSNEQ
Arabidopsis Description
NPF2.14Putative protein NRT1/ PTR FAMILY 2.14 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.