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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65728 Canola cytosol 59.4 88.94
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 98.66 48.68
CDY38595 Canola cytosol, peroxisome, plasma membrane 94.3 47.47
CDY54537 Canola cytosol, peroxisome, plasma membrane 98.32 47.41
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 92.62 46.31
CDY07377 Canola cytosol, peroxisome, plasma membrane 89.93 44.97
CDY04237 Canola cytosol, peroxisome, plasma membrane 86.24 43.19
CDY69522 Canola plasma membrane 38.59 39.38
CDY69519 Canola plasma membrane 38.59 39.38
CDY20187 Canola plasma membrane 38.26 38.78
KRH75378 Soybean plasma membrane 73.15 37.85
VIT_01s0011g03400.t01 Wine grape plasma membrane 70.47 36.02
Solyc05g009500.2.1 Tomato plasma membrane 66.44 34.55
PGSC0003DMT400037693 Potato plasma membrane 66.44 34.14
GSMUA_Achr5P24480_001 Banana plasma membrane 66.44 33.9
CDX86030 Canola plasma membrane 30.87 33.82
Bra038366.1-P Field mustard plasma membrane 52.01 33.41
CDX96007 Canola cytosol, peroxisome, plasma membrane 70.47 30.35
Os06t0264500-01 Rice extracellular 60.4 30.15
Zm00001d045667_P001 Maize cytosol, nucleus, peroxisome 58.05 29.12
EER88193 Sorghum cytosol, golgi, peroxisome 57.72 28.91
TraesCS7A01G206400.1 Wheat cytosol, nucleus, peroxisome 59.06 28.48
TraesCS7B01G113600.2 Wheat cytosol, nucleus, peroxisome 58.05 28.22
TraesCS7D01G209200.1 Wheat cytosol, nucleus, peroxisome 58.39 28.16
HORVU7Hr1G042120.1 Barley cytosol 57.72 27.88
KRH75379 Soybean plasma membrane 44.63 27.71
CDY09846 Canola plasma membrane 34.23 23.78
CDY70561 Canola plasma membrane 39.26 21.51
CDX97728 Canola plasma membrane 39.26 19.73
CDY30141 Canola plasma membrane 38.59 19.39
CDY26715 Canola plasma membrane 36.91 18.97
CDY12696 Canola plasma membrane 31.88 18.38
CDX81495 Canola plasma membrane 31.88 18.3
CDY40280 Canola plasma membrane 34.56 18.13
CDY25813 Canola cytosol, peroxisome, plasma membrane 34.56 18.13
CDX86198 Canola peroxisome 34.56 18.1
CDY52504 Canola plasma membrane 34.56 18.01
CDY05592 Canola plasma membrane 34.56 18.01
CDY28441 Canola cytosol, peroxisome, plasma membrane 34.23 17.96
CDY21692 Canola plasma membrane 34.56 17.94
CDX83801 Canola cytosol, peroxisome, plasma membrane 35.57 17.94
CDX81902 Canola cytosol, peroxisome, plasma membrane 35.23 17.74
CDY56086 Canola cytosol, peroxisome, plasma membrane 34.56 17.43
CDY16763 Canola peroxisome 33.22 17.25
CDY11648 Canola plasma membrane 31.88 17.24
CDY53067 Canola cytosol, peroxisome, plasma membrane 34.23 17.17
CDX87266 Canola peroxisome 32.89 17.1
CDY38766 Canola plasma membrane 31.54 17.06
CDY30731 Canola plasma membrane 33.89 16.86
CDY23545 Canola cytosol, peroxisome, plasma membrane 34.23 16.8
CDY48389 Canola cytosol, peroxisome, plasma membrane 34.23 16.8
CDY45754 Canola plasma membrane 33.89 16.78
CDY11647 Canola plastid 34.56 16.64
CDX84344 Canola plasma membrane 33.56 16.61
CDY38767 Canola plastid 34.56 16.56
CDY18499 Canola plasma membrane 30.87 16.52
CDX96690 Canola plasma membrane 33.56 16.47
CDY45756 Canola plasma membrane 31.54 16.46
CDY00315 Canola plasma membrane 33.56 16.34
CDX99152 Canola plasma membrane 30.54 16.34
CDY36913 Canola cytosol, peroxisome, plasma membrane 33.22 16.1
CDY51783 Canola cytosol, peroxisome, plasma membrane 32.55 16.09
CDY67993 Canola plasma membrane 29.53 15.83
CDX99151 Canola plasma membrane 29.19 15.68
CDY21805 Canola cytosol, peroxisome, plasma membrane 32.55 15.62
CDX68450 Canola cytosol, peroxisome, plasma membrane 32.21 15.61
CDY69433 Canola golgi, peroxisome, plastid 32.89 15.46
CDX83027 Canola cytosol, peroxisome, plasma membrane 31.21 15.45
CDY52480 Canola plasma membrane 23.83 15.4
CDY28371 Canola plasma membrane 24.16 14.81
CDY51257 Canola plastid 23.83 14.61
CDY48147 Canola plasma membrane 26.85 14.52
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 28.52 14.33
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 14.77 12.64
CDX69747 Canola plasma membrane 29.87 5.76
CDX86031 Canola plasma membrane 0.67 1.29
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078JV81UniProt:A0A078JV81EnsemblPlants:CDY69402ProteinID:CDY69402
ProteinID:CDY69402.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00087387001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF178SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EEDC18SEG:seg::::
Description
BnaCnng63330DBnaCnng63330D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JV81]
Coordinates
chrLK039336:-:2..2709
Molecular Weight (calculated)
32495.8 Da
IEP (calculated)
8.916
GRAVY (calculated)
0.295
Length
298 amino acids
Sequence
(BLAST)
001: MEEKSKNKIS EEEKQFHGSS SRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYIALLLG ALGSGGIRPC VVAFGADQFD ESDPKQTTKT WNYFNGYYFC MGAANLVAVT
201: VLVYIQDNVG WGLGLGIPTV AMFLSVIAFV GGFRLYRHLI PSGSPFTRLI QVAVSAFRKR KLRMVSDPTL LYTNDEIDAP ISLGGNLTHT KHMRKIIN
Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)
001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE
Arabidopsis Description
NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.