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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25813 Canola cytosol, peroxisome, plasma membrane 97.36 97.36
CDY40280 Canola plasma membrane 96.83 96.83
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 76.58 75.52
CDY53067 Canola cytosol, peroxisome, plasma membrane 69.19 66.16
CDY56086 Canola cytosol, peroxisome, plasma membrane 68.84 66.16
CDY23545 Canola cytosol, peroxisome, plasma membrane 69.37 64.91
CDY48389 Canola cytosol, peroxisome, plasma membrane 69.37 64.91
CDY11647 Canola plastid 69.37 63.65
CDY38767 Canola plastid 69.54 63.5
KRH74756 Soybean plastid 57.39 52.58
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 57.39 52.41
VIT_01s0026g01490.t01 Wine grape plastid 55.99 51.37
KRH69380 Soybean plastid 56.51 51.03
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 53.7 50.33
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 53.7 50.25
GSMUA_Achr4P17590_001 Banana plasma membrane 35.56 45.19
Os01t0913300-01 Rice plasma membrane 47.01 44.5
HORVU3Hr1G092870.1 Barley plasma membrane 47.18 44.22
TraesCS3D01G414400.1 Wheat plasma membrane 46.65 43.95
TraesCS3B01G454100.1 Wheat plasma membrane 46.48 43.64
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 37.15 43.42
TraesCS3D01G414300.1 Wheat plasma membrane 46.3 43.33
CDY38766 Canola plasma membrane 41.9 43.19
TraesCS3B01G454000.1 Wheat plasma membrane 46.3 43.19
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 43.13 43.06
TraesCS3A01G418700.1 Wheat plasma membrane 45.95 43.0
CDY11648 Canola plasma membrane 41.55 42.83
TraesCS3A01G418800.1 Wheat plasma membrane 46.65 42.6
CDY09846 Canola plasma membrane 30.81 40.79
CDY26715 Canola plasma membrane 41.55 40.69
CDY45756 Canola plasma membrane 40.85 40.63
CDX81902 Canola cytosol, peroxisome, plasma membrane 42.08 40.37
CDX83801 Canola cytosol, peroxisome, plasma membrane 41.37 39.76
CDY30731 Canola plasma membrane 41.9 39.73
CDY21692 Canola plasma membrane 40.14 39.72
CDX84344 Canola plasma membrane 41.9 39.53
CDY00315 Canola plasma membrane 42.43 39.38
CDY52480 Canola plasma membrane 31.87 39.26
CDY45754 Canola plasma membrane 41.37 39.04
CDY36913 Canola cytosol, peroxisome, plasma membrane 41.9 38.7
CDY51783 Canola cytosol, peroxisome, plasma membrane 41.02 38.64
CDX68450 Canola cytosol, peroxisome, plasma membrane 41.2 38.05
CDX87266 Canola peroxisome 38.38 38.05
KXG37624 Sorghum plasma membrane 40.49 38.02
CDY16763 Canola peroxisome 38.38 37.98
CDX86198 Canola peroxisome 38.03 37.96
CDX83027 Canola cytosol, peroxisome, plasma membrane 39.96 37.71
CDY21805 Canola cytosol, peroxisome, plasma membrane 41.2 37.68
CDX96690 Canola plasma membrane 39.79 37.23
CDY69433 Canola golgi, peroxisome, plastid 41.55 37.22
CDY65728 Canola cytosol 13.03 37.19
CDY05592 Canola plasma membrane 37.15 36.89
CDY52504 Canola plasma membrane 37.15 36.89
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.32 35.81
CDY20187 Canola plasma membrane 18.49 35.71
EES13016 Sorghum cytosol, nucleus, plasma membrane 39.79 35.37
CDY07377 Canola cytosol, peroxisome, plasma membrane 36.97 35.23
CDY70561 Canola plasma membrane 33.63 35.11
CDY04237 Canola cytosol, peroxisome, plasma membrane 36.44 34.79
CDX97728 Canola plasma membrane 36.27 34.74
CDY30141 Canola plasma membrane 36.09 34.57
CDY28371 Canola plasma membrane 29.58 34.57
CDY69519 Canola plasma membrane 17.61 34.25
CDY69522 Canola plasma membrane 17.61 34.25
CDY69402 Canola plasma membrane 17.96 34.23
CDY51257 Canola plastid 29.23 34.16
CDY12696 Canola plasma membrane 30.63 33.66
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 20.6 33.62
Os04t0660900-01 Rice plasma membrane, plastid 37.32 33.6
CDY18499 Canola plasma membrane 32.75 33.39
CDX99152 Canola plasma membrane 32.75 33.39
Zm00001d001976_P001 Maize plastid 39.26 33.28
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 34.68 33.22
CDX81495 Canola plasma membrane 30.28 33.14
CDX86030 Canola plasma membrane 15.85 33.09
CDY54537 Canola cytosol, peroxisome, plasma membrane 35.92 33.01
CDY67993 Canola plasma membrane 31.34 32.01
CDX99151 Canola plasma membrane 30.11 30.81
CDY48147 Canola plasma membrane 29.58 30.49
CDX86031 Canola plasma membrane 7.39 27.1
CDX96007 Canola cytosol, peroxisome, plasma membrane 31.34 25.72
CDX69747 Canola plasma membrane 32.04 11.77
CDY68532 Canola cytosol 0.35 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078GSD1UniProt:A0A078GSD1EnsemblPlants:CDY28441ProteinID:CDY28441ProteinID:CDY28441.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00040318001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654
PANTHER:PTHR11654:SF20InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EC3E7FSEG:seg
Description
BnaC07g12690DBnaC07g12690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSD1]
Coordinates
chrLK032220:+:270881..274586
Molecular Weight (calculated)
64019.8 Da
IEP (calculated)
9.325
GRAVY (calculated)
0.284
Length
568 amino acids
Sequence
(BLAST)
001: MEVLENAKNP NNSPERKRGG WIAISFILGN ETLERMGTMG LSANFMAYLA KVFHMKLVDA SNVFNLWLGL SNLAPLLGAI ISDAYVGRFK TIAYASFFSL
101: LGLMTVTLTA WLHQLHPPEC NIHRPDSCDR PNKLQLGVLF LGLGFLSIGS GGIRPCSIPF GVDQFDQRTE KGLKGMASYF NWYYLTFSIV LIVLHTVIVY
201: IQDNISWTVG FSIPTGLMAC SIVLFFVGMR FYVYVKPKGS AFSSIARVIL AARKKRNLKL PVEDDGTVEY YDPPLKPGVL SKLPLTNQYK FLDKAAVITE
301: GDLTSAGVPV NKWRLCSVQE VEEVKCLIRI IPVWSAGIIS VVTMSTQVTF IVPQAMKMDR HMGPHFEIPA GSVSVISFIT IGIWLPIYDR VLVPSLWRIR
401: KFRLTLLQRM GIGIVFGIMS MFTAAIVERV RRTQALKMTQ MSVFWLAWQL VLMGLSESFN YIGQIEFFNS QFPEHMRSLA NSLFPLSFAA SHYLISLLLT
501: TVHKFSGGKD KPDWLDNDLD KGRLDYFYYM IAGLGVVNLV YFWYCVRSYQ YKAGSQIEDL AEEKSLVD
Best Arabidopsis Sequence Match ( AT1G27080.1 )
(BLAST)
001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
Arabidopsis Description
NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.