Factsheet for TraesCS3A01G418800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G454100.1	Wheat	plasma membrane	95.5	98.18
TraesCS3D01G414400.1	Wheat	plasma membrane	94.21	97.18
HORVU3Hr1G092870.1	Barley	plasma membrane	93.89	96.37
TraesCS3A01G418700.1	Wheat	plasma membrane	81.51	83.53
Os01t0913300-01	Rice	plasma membrane	77.33	80.17
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	49.68	54.31
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	41.96	53.7
GSMUA_Achr4P17590_001	Banana	plasma membrane	38.59	53.69
VIT_01s0026g01490.t01	Wine grape	plastid	49.2	49.43
KRH69380	Soybean	plastid	47.75	47.22
CDY40280	Canola	plasma membrane	43.09	47.18
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	43.57	47.05
CDY25813	Canola	cytosol, peroxisome, plasma membrane	42.93	47.01
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.93	47.01
KRH74756	Soybean	plastid	46.78	46.94
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	45.66	46.86
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	45.66	46.79
CDY28441	Canola	cytosol, peroxisome, plasma membrane	42.6	46.65
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	45.98	45.98
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.41	45.69
CDY56086	Canola	cytosol, peroxisome, plasma membrane	43.25	45.52
CDY53067	Canola	cytosol, peroxisome, plasma membrane	43.25	45.29
KRG99182	Soybean	plasma membrane	40.84	44.25
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	43.89	44.03
CDY48389	Canola	cytosol, peroxisome, plasma membrane	42.93	43.99
Bra016260.1-P	Field mustard	plasma membrane	38.91	43.92
CDY38766	Canola	plasma membrane	38.91	43.92
CDY11648	Canola	plasma membrane	38.75	43.74
CDY11647	Canola	plastid	43.41	43.62
Bra016259.1-P	Field mustard	plastid	43.57	43.57
CDY38767	Canola	plastid	43.57	43.57
CDY23545	Canola	cytosol, peroxisome, plasma membrane	42.44	43.49
AT1G69860.1	Thale cress	plasma membrane	38.75	43.42
TraesCS4A01G283900.1	Wheat	golgi, unclear	41.16	42.88
TraesCS2A01G045500.1	Wheat	plasma membrane	39.55	41.07
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	38.91	39.54
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	39.07	39.45
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.38	38.66
TraesCS1A01G257400.1	Wheat	plasma membrane	34.24	34.92
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	34.08	34.3
TraesCS3A01G304400.1	Wheat	plasma membrane	32.15	34.01
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	32.96	33.88
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	32.15	33.67
TraesCS4A01G440300.1	Wheat	plasma membrane	29.26	33.03
TraesCS7A01G054100.1	Wheat	plasma membrane	29.1	32.26
TraesCS4A01G440700.1	Wheat	plasma membrane	28.94	32.2
TraesCS4A01G440400.1	Wheat	plasma membrane	28.14	31.76
TraesCS7A01G054000.2	Wheat	plasma membrane	27.97	31.58
TraesCS4A01G440500.1	Wheat	plasma membrane	27.81	31.4
TraesCS3A01G304500.1	Wheat	cytosol, peroxisome, plasma membrane	29.42	31.39
TraesCS5A01G153200.1	Wheat	plasma membrane	29.42	31.34
TraesCS4A01G440600.1	Wheat	plasma membrane	27.65	31.22
TraesCS7A01G121700.1	Wheat	golgi, peroxisome, plasma membrane	28.14	30.76
TraesCS7A01G121600.1	Wheat	plastid	26.21	29.48

Protein Annotations

EnsemblPlants:TraesCS3A01G418800.1	EnsemblPlantsGene:TraesCS3A01G418800	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846
InterPro:MFS_dom	InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	PFAM:PF00854
SEG:seg	SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:

Description

No Description!

Coordinates

chr3A:+:660507889..660511337

Molecular Weight (calculated)

68217.5 Da

IEP (calculated)

8.687

GRAVY (calculated)

0.293

Length

622 amino acids

Sequence
(BLAST)

001: MAAPAAEVEM GGGEALLEEG AGGSGARRGG RRKPLGWKCM PFIIATETFE KVGSVGVAAN LTVYLVNRYN IGRLAAANIT NIFYGTLNFA PLLGAFISDA
101: YLGRFRTLAY GSFFSLLGML GLTLSASVPA LKPPDCSQTA QLGGHCNSPS TLQLSVLYIS LAFLTIGGGA IRPCSLPFGV DQFDMTDEKS RKGLNSYYNW
201: YYGTTTAALV FSMTILIYIQ NSISWPIGFG IPTFFMLFSI IILFMGTRRY VHVPPEGSIF TGIAQVLVAS FKKRRLKLPH PDNINQQELL LFSPPIGGHR
301: IFRLPLTSQF RHSCAGKCKS FFCKCLNKGA IVRDGDINDD GSARNSWELC SIQQIEEVKC LLRIVPICIS GIICFVALAQ QFTYIILQTL TMDCHLGTHF
401: EIPAGSVISI SLIALTAFLP IYDRILVPIA RRFTGVESGI TLLQRQGIGL VISPISMVVA GLVEHKRRNS ALSNGGKSPM SVLWLAPQLI LMGIAEAFNA
501: VGQIEFYNKQ FPEQMLTLAG SLFFVTLAGA NYLSTALANI TRKVTTRDGH TSWLTDDINL GKLDYYFYFI ALIGVLNLFY FLICSHYYQY KSMSLHAEES
601: IKVHTKEEAE AEVNANTDAP KK

Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)

001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK

Arabidopsis Description

NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.