Factsheet for TraesCS3A01G418700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G414300.1	Wheat	plasma membrane	94.07	94.07
TraesCS3B01G454000.1	Wheat	plasma membrane	93.9	93.6
TraesCS3A01G418800.1	Wheat	plasma membrane	83.53	81.51
Os01t0913300-01	Rice	plasma membrane	71.99	72.83
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	41.19	51.44
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	47.61	50.79
GSMUA_Achr4P17590_001	Banana	plasma membrane	36.24	49.22
VIT_01s0026g01490.t01	Wine grape	plastid	47.45	46.53
CDY40280	Canola	plasma membrane	43.16	46.13
CDY25813	Canola	cytosol, peroxisome, plasma membrane	43.0	45.95
CDY28441	Canola	cytosol, peroxisome, plasma membrane	43.0	45.95
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.0	45.95
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	43.16	45.49
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.15	45.35
KRH74756	Soybean	plastid	46.29	45.32
CDY56086	Canola	cytosol, peroxisome, plasma membrane	43.99	45.18
KRH69380	Soybean	plastid	46.79	45.15
CDY53067	Canola	cytosol, peroxisome, plasma membrane	43.99	44.95
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	44.32	44.39
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	45.47	44.37
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	44.32	44.32
CDY48389	Canola	cytosol, peroxisome, plasma membrane	43.66	43.66
CDY11647	Canola	plastid	44.48	43.62
Bra016259.1-P	Field mustard	plastid	44.65	43.57
CDY38767	Canola	plastid	44.65	43.57
CDY23545	Canola	cytosol, peroxisome, plasma membrane	43.33	43.33
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	43.82	42.9
KRG99182	Soybean	plasma membrane	40.36	42.68
TraesCS4A01G283900.1	Wheat	golgi, unclear	40.2	40.87
CDY38766	Canola	plasma membrane	36.9	40.65
Bra016260.1-P	Field mustard	plasma membrane	36.74	40.47
AT1G69860.1	Thale cress	plasma membrane	36.9	40.36
CDY11648	Canola	plasma membrane	36.57	40.29
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	22.24	39.24
TraesCS2A01G045500.1	Wheat	plasma membrane	37.23	37.73
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	36.74	36.44
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	36.57	36.04
TraesCS1A01G257400.1	Wheat	plasma membrane	35.09	34.92
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	33.44	33.55
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	32.78	33.5
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	33.94	33.33
TraesCS3A01G304400.1	Wheat	plasma membrane	31.63	32.65
TraesCS3A01G304500.1	Wheat	cytosol, peroxisome, plasma membrane	30.15	31.39
TraesCS4A01G440300.1	Wheat	plasma membrane	28.34	31.22
TraesCS7A01G054100.1	Wheat	plasma membrane	27.51	29.77
TraesCS4A01G440700.1	Wheat	plasma membrane	27.35	29.7
TraesCS7A01G054000.2	Wheat	plasma membrane	26.85	29.58
TraesCS4A01G440400.1	Wheat	plasma membrane	26.85	29.58
TraesCS4A01G440500.1	Wheat	plasma membrane	26.69	29.4
TraesCS4A01G440600.1	Wheat	plasma membrane	26.52	29.22
TraesCS7A01G121700.1	Wheat	golgi, peroxisome, plasma membrane	27.18	29.0
TraesCS5A01G153200.1	Wheat	plasma membrane	27.84	28.94
TraesCS7A01G121600.1	Wheat	plastid	24.88	27.31

Protein Annotations

EnsemblPlants:TraesCS3A01G418700.1	EnsemblPlantsGene:TraesCS3A01G418700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr3A:+:660436466..660443786

Molecular Weight (calculated)

66794.6 Da

IEP (calculated)

8.369

GRAVY (calculated)

0.311

Length

607 amino acids

Sequence
(BLAST)

001: MAAPGTAAEV EVDVGGGALE RGAGGGGDRR KPQGWKCMPF ILAIATFENV GSLGMVANLA LYLVKRFNFG QLTAINTTNI FFGTLNFTPL LGAFISDAYL
101: GRFRTLAYGS FFSLLGMLGL TLSASVPAFK LADCNQTVQL GEHCNSPSTL QLSVLYLSLA FLIIGGGAIR PCSLPFGVDQ FDMTDRNSQK GLNSYYNWYY
201: GTTNIALVFS MTILVYIQAT ISWPIGFGIP TFFMLLSIII LFMGTRLYVH VPPEGSIYTG IAQVLLASFK KRRLKLPNSN DISQQELLLF SPPTRGHRIF
301: RLPLTSQFRF LNKGAILRDG DINDDGSARN SWELCSIQQI EEVKCLIRIF PICISGIVCF IALVQQYTSA SFQALTMDCH LGTHFEIPAG SVISISFIAL
401: TAFLPIYGRI LVPIARRFTG VESGITVLQR QGIGLVISPI SMVVAGLVEH KRRNSALSNG GKSPMSVFWL APQLILMGIA DAFNAVGQLE FYNKQFPEQM
501: LTLAGSLFYV TLAGAGYLST AMTNITNKVT TRDAHRGWIA DDINLGKLDY YFYLIALVGV LNLFYFLICS HYYQYKSISH YAEEPIKIQT KEEAEAEMDP
601: SRDAPHK

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.