Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G454000.1 | Wheat | plasma membrane | 95.22 | 94.91 |
| TraesCS3A01G418700.1 | Wheat | plasma membrane | 94.07 | 94.07 |
| TraesCS3D01G414400.1 | Wheat | plasma membrane | 82.37 | 82.92 |
| Os01t0913300-01 | Rice | plasma membrane | 72.65 | 73.5 |
| GSMUA_Achr2P12500_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 41.68 | 52.06 |
| GSMUA_Achr7P01710_001 | Banana | cytosol, peroxisome, plasma membrane | 48.43 | 51.67 |
| GSMUA_Achr4P17590_001 | Banana | plasma membrane | 36.41 | 49.44 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 47.94 | 47.01 |
| Bra012429.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 43.49 | 46.48 |
| CDY40280 | Canola | plasma membrane | 43.49 | 46.48 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 43.33 | 46.3 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 43.33 | 46.3 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 43.66 | 46.01 |
| Bra007886.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.15 | 45.35 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 43.99 | 45.18 |
| KRH74756 | Soybean | plastid | 46.13 | 45.16 |
| KRH69380 | Soybean | plastid | 46.62 | 44.99 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 43.99 | 44.95 |
| KRG99183 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 45.47 | 44.37 |
| PGSC0003DMT400045466 | Potato | cytosol, peroxisome, plasma membrane | 44.15 | 44.22 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 44.15 | 44.15 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 43.66 | 43.66 |
| CDY11647 | Canola | plastid | 44.48 | 43.62 |
| CDY38767 | Canola | plastid | 44.65 | 43.57 |
| Bra016259.1-P | Field mustard | plastid | 44.65 | 43.57 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.15 | 43.23 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 43.16 | 43.16 |
| KRG99182 | Soybean | plasma membrane | 40.36 | 42.68 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 40.53 | 41.28 |
| CDY38766 | Canola | plasma membrane | 37.07 | 40.83 |
| Bra016260.1-P | Field mustard | plasma membrane | 36.9 | 40.65 |
| AT1G69860.1 | Thale cress | plasma membrane | 37.07 | 40.54 |
| CDY11648 | Canola | plasma membrane | 36.74 | 40.47 |
| Bra003979.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 22.24 | 39.24 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 37.89 | 38.4 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 37.07 | 37.38 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.07 | 36.82 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.9 | 36.48 |
| TraesCS1D01G256700.1 | Wheat | plasma membrane | 34.93 | 34.87 |
| TraesCS1D01G257200.1 | Wheat | cytosol, nucleus, plasma membrane | 33.28 | 34.01 |
| TraesCS1D01G257100.1 | Wheat | plasma membrane | 33.11 | 33.33 |
| TraesCS7D01G209200.1 | Wheat | cytosol, nucleus, peroxisome | 33.11 | 32.52 |
| TraesCS3D01G297600.1 | Wheat | plasma membrane | 31.47 | 32.48 |
| TraesCS3D01G297400.1 | Wheat | plasma membrane | 30.31 | 31.51 |
| TraesCS7D01G049400.1 | Wheat | plasma membrane | 28.01 | 30.36 |
| TraesCS5D01G158500.1 | Wheat | plasma membrane | 28.17 | 29.9 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 27.35 | 29.86 |
| TraesCS7D01G120200.1 | Wheat | cytosol, plasma membrane, vacuole | 27.68 | 29.58 |
| TraesCS7D01G049300.1 | Wheat | plasma membrane | 26.36 | 29.04 |
| TraesCS7D01G119900.1 | Wheat | plasma membrane | 26.69 | 28.52 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G414300.1 | EnsemblPlantsGene:TraesCS3D01G414300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF20 | PFAM:PF00854 | SEG:seg |
| SUPFAM:SSF103473 | TIGR:cd06174 | TMHMM:TMhelix | MapMan:24.2.2.9 | : | : |
Description
No Description!
Coordinates
chr3D:+:526192020..526208492
Molecular Weight (calculated)
66650.3 Da
IEP (calculated)
8.369
GRAVY (calculated)
0.315
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPGAAAEV EVEVGDGALE RGTGGGGGRR KPQGWKCMPF ILAIATFENV GSLGVVANLT VYLVKRFNFG QLTAINTTSI FFGTLNFAPL LGAFISDAYL
101: GRFRTLAYGS FFSLLGMLGL TLSASVPAFK LADCNQTIQS GEHCNSPSTL QLSVLYLSLS FLIIGGGAIR PCSLPFGVDQ FEMTDKNSQK GLNSYYNWYY
201: GTTTIALVFS MTILVYIQAT ISWPIGFGIP TFFMLLSIII LFMGTRLYVH VPPEGSIFTG IAQVLLASFK KRRLKLPNSD DISQQELLLF SPPMRGHRIF
301: RLPLTSQFRF LNKGAILRDG DINDDGSARN SWELCSIQQI EEVKCLIRIV PICISGIVCF VALVQQYSSA SFQALTMDCN LGTHFEIPAG SVISISFIAL
401: TAFLPIYDRI LVPIARRFTG VESGITLLQR QGIGLVISPI STVVAGLVEH KRRNSALSNG GKSPMSVFWL APQLILMGIA DAFNAVGQLE FYNKQFPEHM
501: LTLAGSLFYV TLAGAGYLSA AMTNITKKVT TRDGHRSWIA DDINLGKLDY YFYLIAFMGV LNLFYFLICS HYYQYKSISH YAEEPIKIQT KEEAEGAMDP
601: SRDAPNK
101: GRFRTLAYGS FFSLLGMLGL TLSASVPAFK LADCNQTIQS GEHCNSPSTL QLSVLYLSLS FLIIGGGAIR PCSLPFGVDQ FEMTDKNSQK GLNSYYNWYY
201: GTTTIALVFS MTILVYIQAT ISWPIGFGIP TFFMLLSIII LFMGTRLYVH VPPEGSIFTG IAQVLLASFK KRRLKLPNSD DISQQELLLF SPPMRGHRIF
301: RLPLTSQFRF LNKGAILRDG DINDDGSARN SWELCSIQQI EEVKCLIRIV PICISGIVCF VALVQQYSSA SFQALTMDCN LGTHFEIPAG SVISISFIAL
401: TAFLPIYDRI LVPIARRFTG VESGITLLQR QGIGLVISPI STVVAGLVEH KRRNSALSNG GKSPMSVFWL APQLILMGIA DAFNAVGQLE FYNKQFPEHM
501: LTLAGSLFYV TLAGAGYLSA AMTNITKKVT TRDGHRSWIA DDINLGKLDY YFYLIAFMGV LNLFYFLICS HYYQYKSISH YAEEPIKIQT KEEAEGAMDP
601: SRDAPNK
001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
Arabidopsis Description
NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.