Factsheet for TraesCS1D01G257200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	98.15	98.15
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	97.98	97.98
HORVU1Hr1G063470.10	Barley	peroxisome	92.59	91.51
Os05t0410900-02	Rice	plasma membrane	84.01	83.44
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	80.98	80.3
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	80.3	79.9
GSMUA_Achr8P21720_001	Banana	nucleus	63.47	61.2
TraesCS1D01G256700.1	Wheat	plasma membrane	61.11	59.7
TraesCS1D01G257100.1	Wheat	plasma membrane	57.91	57.05
VIT_08s0040g00830.t01	Wine grape	peroxisome	57.41	56.93
KRH66698	Soybean	plasma membrane	49.49	54.95
KRH66693	Soybean	mitochondrion	55.22	53.77
KRG95048	Soybean	cytosol, nucleus, plasma membrane	54.71	53.28
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	53.87	52.03
PGSC0003DMT400065326	Potato	plasma membrane	52.36	50.9
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	26.43	49.84
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	51.35	49.35
TraesCS3D01G297400.1	Wheat	plasma membrane	35.19	35.79
TraesCS4D01G026800.1	Wheat	golgi, unclear	35.86	35.74
TraesCS5D01G045300.1	Wheat	cytosol, peroxisome, plasma membrane	36.87	35.67
TraesCS2D01G044000.1	Wheat	plasma membrane	35.02	34.55
TraesCS3D01G297600.1	Wheat	plasma membrane	34.01	34.35
TraesCS5D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	35.19	34.21
TraesCS2D01G044200.1	Wheat	plasma membrane	34.18	33.89
TraesCS3D01G414400.1	Wheat	plasma membrane	34.18	33.66
TraesCS3D01G414300.1	Wheat	plasma membrane	34.01	33.28
TraesCS5D01G158500.1	Wheat	plasma membrane	31.48	32.69
TraesCS7D01G120200.1	Wheat	cytosol, plasma membrane, vacuole	30.64	32.04
TraesCS7D01G049400.1	Wheat	plasma membrane	30.13	31.96
TraesCS7D01G049300.1	Wheat	plasma membrane	29.46	31.76
TraesCS7D01G119900.1	Wheat	plasma membrane	30.3	31.69
TraesCS7D01G119800.1	Wheat	plasma membrane	29.63	31.65

Protein Annotations

EnsemblPlants:TraesCS1D01G257200.1	EnsemblPlantsGene:TraesCS1D01G257200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF196	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr1D:-:349537455..349541546

Molecular Weight (calculated)

64979.3 Da

IEP (calculated)

9.717

GRAVY (calculated)

0.168

Length

594 amino acids

Sequence
(BLAST)

001: MAEDGRERAE DAAETTKKAK QGGFRTMPFI LANDFCDRLA TVGFGSNLIS YLTLQLHLPL VEASNVLTNY HGTTNLTPLV GGLIADSFAG RFWTITVGSI
101: IYQLGMVCLT LSAALPSLRP PPCAKHAAEC QRASTYQIAI LYLSLLCTSI GAGGSRPCNM AFGADQLELG ARRRRSANGG KAPMWSFFNL YFFGIELAKL
201: TAVTVVVYIQ ENVGWGWGLG VPTIAMFVAV IGFVSGYSLY VKMPPGGSPL VRLAQVVAAA FKKRKTVLPD PDLLYEDKKL DAGISTTGRL LHTNQLKFFD
301: KAAIVTEGDV LPSGEPKLWR LSTVHRVEEI KSIIRMLPIW AAGILMVTAS SHNSSFAIQQ ARTMDRDITR SFKIPPASML IFTNLAMLIT LAFYDRVLVR
401: VLRRFTGRPN GITHLQRAGV GMTIAMLANV AAAAVETRRK SVAAASGMLD APKGATLPIS VFWLVPQYAI HGIADAFMDV GRMEFLYDQA PESMRSTAAA
501: LYWLTISAGS YLGTLLVTIV HEKTRASGQW LQDNLNRGKL DNYYWLVVGL QGLNLVYYFV CVKYYTFKPL ETEVEHQPGH GNGTESAKKG VSYK

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.