Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G454100.1 | Wheat | plasma membrane | 97.51 | 97.19 |
| HORVU3Hr1G092870.1 | Barley | plasma membrane | 95.69 | 95.21 |
| TraesCS3A01G418800.1 | Wheat | plasma membrane | 97.18 | 94.21 |
| TraesCS3D01G414300.1 | Wheat | plasma membrane | 82.92 | 82.37 |
| Os01t0913300-01 | Rice | plasma membrane | 79.44 | 79.83 |
| GSMUA_Achr7P01710_001 | Banana | cytosol, peroxisome, plasma membrane | 51.08 | 54.13 |
| GSMUA_Achr2P12500_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 43.45 | 53.91 |
| GSMUA_Achr4P17590_001 | Banana | plasma membrane | 39.47 | 53.24 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 50.25 | 48.95 |
| CDY40280 | Canola | plasma membrane | 44.11 | 46.83 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 47.1 | 46.79 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 44.61 | 46.7 |
| PGSC0003DMT400045466 | Potato | cytosol, peroxisome, plasma membrane | 46.93 | 46.7 |
| Bra012429.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 43.95 | 46.65 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 43.95 | 46.65 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 43.95 | 46.65 |
| KRH69380 | Soybean | plastid | 48.59 | 46.58 |
| KRH74756 | Soybean | plastid | 47.6 | 46.29 |
| Bra007886.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.78 | 45.69 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 44.61 | 45.52 |
| KRG99183 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 46.77 | 45.34 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 44.61 | 45.29 |
| KRG99182 | Soybean | plasma membrane | 41.96 | 44.08 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 44.28 | 43.99 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.94 | 43.71 |
| CDY11647 | Canola | plastid | 44.78 | 43.62 |
| CDY38767 | Canola | plastid | 44.94 | 43.57 |
| Bra016259.1-P | Field mustard | plastid | 44.94 | 43.57 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 43.78 | 43.49 |
| CDY38766 | Canola | plasma membrane | 39.64 | 43.38 |
| Bra016260.1-P | Field mustard | plasma membrane | 39.64 | 43.38 |
| CDY11648 | Canola | plasma membrane | 39.47 | 43.19 |
| AT1G69860.1 | Thale cress | plasma membrane | 39.3 | 42.7 |
| TraesCS4D01G026800.1 | Wheat | golgi, unclear | 42.12 | 42.62 |
| TraesCS2D01G044200.1 | Wheat | plasma membrane | 40.63 | 40.9 |
| TraesCS2D01G044000.1 | Wheat | plasma membrane | 39.8 | 39.87 |
| TraesCS5D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.8 | 39.28 |
| TraesCS5D01G045300.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.8 | 39.09 |
| Bra003979.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 22.22 | 38.95 |
| TraesCS1D01G256700.1 | Wheat | plasma membrane | 35.66 | 35.36 |
| TraesCS3D01G297600.1 | Wheat | plasma membrane | 33.5 | 34.35 |
| TraesCS1D01G257200.1 | Wheat | cytosol, nucleus, plasma membrane | 33.66 | 34.18 |
| TraesCS1D01G257100.1 | Wheat | plasma membrane | 34.0 | 34.0 |
| TraesCS7D01G209200.1 | Wheat | cytosol, nucleus, peroxisome | 34.49 | 33.66 |
| TraesCS7D01G049400.1 | Wheat | plasma membrane | 30.02 | 32.32 |
| TraesCS5D01G158500.1 | Wheat | plasma membrane | 30.51 | 32.17 |
| TraesCS3D01G297400.1 | Wheat | plasma membrane | 30.51 | 31.51 |
| TraesCS7D01G119800.1 | Wheat | plasma membrane | 29.02 | 31.47 |
| TraesCS7D01G049300.1 | Wheat | plasma membrane | 28.52 | 31.22 |
| TraesCS7D01G120200.1 | Wheat | cytosol, plasma membrane, vacuole | 29.02 | 30.81 |
| TraesCS7D01G119900.1 | Wheat | plasma membrane | 28.36 | 30.11 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G414400.1 | EnsemblPlantsGene:TraesCS3D01G414400 | Gene3D:1.20.1250.20 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:MFS_trans_sf |
| InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF20 | PFAM:PF00854 | SEG:seg | SUPFAM:SSF103473 |
| TMHMM:TMhelix | MapMan:24.2.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:526274161..526277564
Molecular Weight (calculated)
66105.1 Da
IEP (calculated)
8.888
GRAVY (calculated)
0.328
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEVEMGAG GALLEGGAGG RRGGRRRQPL GWRCMPFIIA TETFEKVGSV GVAANLTVYL VKRYNIGRLA AANITNIFYG TLNFAPLLGA FISDAYLGRF
101: RTLAYGSFFS LLGMLGLTLS ASVPALKPPG CSQTAQLGGH CDSPSTLQLS VLYISLAFLT IGGGAIRPCS LPFGVDQFDM TDEKSRKGLN SYYNWYYGTT
201: TAALVFSMTI LIYIQNSISW PIGFGIPTFF MLMSIIILFM GTRLYVHVPP EGSIFTGIAQ VLVASFKKRR LKLPHPDNIN QQELLLFSPP IGGHRIFRLP
301: LTSQFRCLNK GAIVRDGDIN DDGSARNSWE LCSIQQIEEV KCLLRIVPIC ISGIICFVAL AQQFTYIILQ TLTMDCHLGT HFEIPAGSVI SISLIALTAF
401: LPIYGRILVP IARRFTGVES GITLLQRQGI GLVISPISMV VAGLVEHKRR NSALSNGGKS PMSVMWLAPQ LILMGIAEAF NAVGQIEFYN KQFPEQMLTL
501: AGSLFFVTLA GANYLSTALA NITRKVTTRD GHTSWLTDDI NLGKLDYYFY FIALIGVLNL FYFLICSHYY QYKSMSLHAE ESIKVHTKEE AEAEADANTA
601: PKK
101: RTLAYGSFFS LLGMLGLTLS ASVPALKPPG CSQTAQLGGH CDSPSTLQLS VLYISLAFLT IGGGAIRPCS LPFGVDQFDM TDEKSRKGLN SYYNWYYGTT
201: TAALVFSMTI LIYIQNSISW PIGFGIPTFF MLMSIIILFM GTRLYVHVPP EGSIFTGIAQ VLVASFKKRR LKLPHPDNIN QQELLLFSPP IGGHRIFRLP
301: LTSQFRCLNK GAIVRDGDIN DDGSARNSWE LCSIQQIEEV KCLLRIVPIC ISGIICFVAL AQQFTYIILQ TLTMDCHLGT HFEIPAGSVI SISLIALTAF
401: LPIYGRILVP IARRFTGVES GITLLQRQGI GLVISPISMV VAGLVEHKRR NSALSNGGKS PMSVMWLAPQ LILMGIAEAF NAVGQIEFYN KQFPEQMLTL
501: AGSLFFVTLA GANYLSTALA NITRKVTTRD GHTSWLTDDI NLGKLDYYFY FIALIGVLNL FYFLICSHYY QYKSMSLHAE ESIKVHTKEE AEAEADANTA
601: PKK
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.