Factsheet for Bra016259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38767	Canola	plastid	99.84	99.84
CDY11647	Canola	plastid	98.23	98.71
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	90.19	94.92
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	85.37	85.65
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	46.14	83.43
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.34	69.37
KRH74756	Soybean	plastid	59.81	60.0
VIT_01s0026g01490.t01	Wine grape	plastid	58.68	58.97
KRH69380	Soybean	plastid	59.0	58.35
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	57.88	57.88
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	54.34	55.78
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	53.54	54.86
GSMUA_Achr4P17590_001	Banana	plasma membrane	36.33	50.56
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	37.62	48.15
Bra016260.1-P	Field mustard	plasma membrane	42.28	47.73
Os01t0913300-01	Rice	plasma membrane	45.66	47.33
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	42.6	46.57
Bra035886.1-P	Field mustard	plasma membrane	36.82	46.08
HORVU3Hr1G092870.1	Barley	plasma membrane	44.21	45.38
TraesCS3D01G414400.1	Wheat	plasma membrane	43.57	44.94
TraesCS3B01G454100.1	Wheat	plasma membrane	43.57	44.79
TraesCS3B01G454000.1	Wheat	plasma membrane	43.73	44.66
TraesCS3A01G418700.1	Wheat	plasma membrane	43.57	44.65
TraesCS3D01G414300.1	Wheat	plasma membrane	43.57	44.65
Bra010111.1-P	Field mustard	plasma membrane	43.25	43.95
TraesCS3A01G418800.1	Wheat	plasma membrane	43.57	43.57
Bra025695.1-P	Field mustard	plasma membrane	40.51	43.45
Bra029248.1-P	Field mustard	plasma membrane	42.6	43.3
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.28	42.76
Bra019521.1-P	Field mustard	plasma membrane	41.8	42.55
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.96	42.44
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.35	42.4
Bra035885.1-P	Field mustard	peroxisome	36.98	40.78
Bra020609.1-P	Field mustard	plasma membrane	36.17	39.34
Bra038366.1-P	Field mustard	plasma membrane	29.26	39.22
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.3	39.19
Bra009996.1-P	Field mustard	peroxisome	35.69	39.02
KXG37624	Sorghum	plasma membrane	36.98	38.02
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.17	37.75
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.33	37.42
EES13016	Sorghum	cytosol, nucleus, plasma membrane	37.46	36.46
Os04t0660900-01	Rice	plasma membrane, plastid	36.98	36.45
Bra027185.1-P	Field mustard	plasma membrane	34.73	36.42
Bra018952.1-P	Field mustard	plasma membrane	34.08	34.98
Bra033955.1-P	Field mustard	plasma membrane	30.39	34.43
Zm00001d001976_P001	Maize	plastid	36.98	34.33
Bra021295.1-P	Field mustard	plasma membrane	30.39	33.93
Bra033884.1-P	Field mustard	plasma membrane	13.18	32.93
Bra033836.1-P	Field mustard	plasma membrane	26.05	31.03
Bra021168.1-P	Field mustard	plasma membrane	35.37	25.26
Bra016534.1-P	Field mustard	plastid	40.19	24.22
Bra038280.1-P	Field mustard	plasma membrane	27.65	15.4
Bra008953.1-P	Field mustard	plasma membrane	29.42	11.84

Protein Annotations

EnsemblPlants:Bra016259.1	EnsemblPlants:Bra016259.1-P	EnsemblPlantsGene:Bra016259	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000254190F	UniProt:M4DID2	MapMan:24.2.2.9	:

Description

AT1G69870 (E=2e-283) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA07:+:18605348..18609908

Molecular Weight (calculated)

68746.8 Da

IEP (calculated)

9.267

GRAVY (calculated)

0.184

Length

622 amino acids

Sequence
(BLAST)

001: MGLKDTKDGT SLPRSSPSFS RATKPSPEMH AVNSYNPKST SDSFSDGEKV EKKPGGWRAV TFILGNETLE RLGTIGLLSN FMVYLTRVFH LEQVDASNVI
101: NIWSGFTNLT PLVGAFISDA YVGRFKTIAF ASFATLLGLV TLTLTASLPQ LHPATCNSKD PVSCGGPNKL QFGILLLGLG FLSIGSGGIR PCSIPFGVDQ
201: FDQRTEEGIK GVASFFNWYY MTFTIVLLIT QTVVVYIQDQ VSWVIGFSVP TGLMACAVVM FFAGMKLYVY VKPEGSIFSG IAQVVVAARK KRKMKLPEED
301: DGTVTYYDPP VKESVLSKLH HSNQFRFLDK AAVIIEGDLT PEGVPANKWR LCSIQEVEEV KCLIRIVPVW SAGIISLAAM SQQGTFTVSQ ALKMDRHMGP
401: NFEIPAGSLS VISLLTIGVF LPLYDRVLVP FLRRITGHKS GITLLQRIGT GIVFAILSMI VAGLVERKRR IRSINAGDPT GMTPMSVFWL SPQLILMGLC
501: EAFNIIGQIE FFNSQFPEHM RSIANSLFSL SFAGSNYLSS LIVTTVHRFS GGHDRPDWLN KNLNAGKLDY FYYLIAVLGV FNLVYFWYCA RGYRYKVGLQ
601: MGDFEDNKSF SDVEMSSKKQ LK

Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)

001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK

Arabidopsis Description

NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.