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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36913 Canola cytosol, peroxisome, plasma membrane 99.67 99.67
CDY51783 Canola cytosol, peroxisome, plasma membrane 97.4 99.34
Bra019521.1-P Field mustard plasma membrane 89.59 90.18
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 87.48 87.48
AT3G47960.1 Thale cress plasma membrane 84.55 81.76
Bra029248.1-P Field mustard plasma membrane 79.51 79.9
Bra035886.1-P Field mustard plasma membrane 64.55 79.88
Bra010111.1-P Field mustard plasma membrane 79.02 79.41
Bra035885.1-P Field mustard peroxisome 70.08 76.42
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 59.51 61.82
Bra025695.1-P Field mustard plasma membrane 58.21 61.72
Solyc03g113420.2.1 Tomato plasma membrane 56.1 58.77
PGSC0003DMT400065196 Potato plasma membrane 56.26 58.54
KRH03408 Soybean cytosol, peroxisome, plasma membrane 55.77 57.94
KRH56970 Soybean cytosol, peroxisome, plasma membrane 55.61 57.29
KRH56968 Soybean plasma membrane 54.31 56.04
KRH03412 Soybean plasma membrane 53.01 55.63
KRH56969 Soybean plasma membrane 54.63 54.99
KRH03409 Soybean plasma membrane 54.31 54.58
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 47.32 51.96
GSMUA_Achr4P22320_001 Banana plasma membrane 41.79 50.79
Os03t0687000-02 Rice plasma membrane 46.99 49.23
Os12t0638300-01 Rice extracellular, plasma membrane 46.67 48.89
TraesCS4D01G026800.1 Wheat golgi, unclear 47.32 48.83
TraesCS4A01G283900.1 Wheat golgi, unclear 47.15 48.58
Zm00001d013529_P002 Maize plasma membrane 46.67 48.56
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 46.83 48.4
GSMUA_Achr5P15030_001 Banana cytosol 37.24 48.31
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 46.18 48.22
EER91066 Sorghum cytosol, peroxisome, plasma membrane 46.34 48.06
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 46.67 47.75
TraesCS2A01G045500.1 Wheat plasma membrane 46.02 47.25
TraesCS2D01G044200.1 Wheat plasma membrane 46.02 47.25
Zm00001d031213_P001 Maize plasma membrane 38.86 46.95
TraesCS2B01G057700.1 Wheat plasma membrane 45.53 46.74
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 45.37 45.59
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 43.58 45.58
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 45.04 45.34
TraesCS2D01G044000.1 Wheat plasma membrane 44.23 45.18
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 44.55 45.14
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 44.39 45.12
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 44.23 45.03
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 44.88 44.95
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 44.72 44.64
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 44.39 44.17
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 44.06 44.14
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 42.28 43.99
EES16414 Sorghum cytosol, peroxisome, plasma membrane 42.6 43.89
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 41.95 43.43
EER98133 Sorghum plasma membrane 45.53 43.01
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 39.02 42.25
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 23.58 42.15
Bra016259.1-P Field mustard plastid 42.44 41.96
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 44.72 40.09
Bra016260.1-P Field mustard plasma membrane 34.47 38.48
Bra038366.1-P Field mustard plasma membrane 28.46 37.72
Bra009996.1-P Field mustard peroxisome 33.66 36.38
Bra020609.1-P Field mustard plasma membrane 33.5 36.01
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 34.63 35.98
Bra016534.1-P Field mustard plastid 59.51 35.47
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 34.63 35.26
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 33.66 34.73
Bra033836.1-P Field mustard plasma membrane 28.46 33.52
Bra027185.1-P Field mustard plasma membrane 32.03 33.22
Bra018952.1-P Field mustard plasma membrane 32.52 33.0
Bra033955.1-P Field mustard plasma membrane 29.11 32.6
Bra021295.1-P Field mustard plasma membrane 28.78 31.78
Bra033884.1-P Field mustard plasma membrane 12.03 29.72
Bra021168.1-P Field mustard plasma membrane 32.2 22.73
Bra038280.1-P Field mustard plasma membrane 27.15 14.95
Bra008953.1-P Field mustard plasma membrane 27.8 11.06
Protein Annotations
MapMan:24.2.2.9EnsemblPlantsGene:Bra018096EnsemblPlants:Bra018096.1EnsemblPlants:Bra018096.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:IPR020846UniProt:M4DNK9InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000253F383
SEG:seg:::::
Description
AT3G47960 (E=7e-285) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA06:+:10206447..10209104
Molecular Weight (calculated)
68057.2 Da
IEP (calculated)
9.097
GRAVY (calculated)
0.276
Length
615 amino acids
Sequence
(BLAST)
001: MERKPFEVET TKTDEDQKPY SAVDGGGSDS VDSFDEDQKK LVYRGWKVMP FIIGNETFEK IGIIGTLSNL LVYLTQVFNL KKYTAATIIN AFSGTINFGT
101: FLAAFLCDTY FGRYKTLSVA VIACFLGSLA ILLTAAVPGL HPTPCGTKSS CEGPGAGQIL FLMLGLALLV VGAGGIRPCN LAFGADQFNP KSESGKKGIN
201: SFFNWYFFTF TFAQIISLTL VVYIQSNVSW TIGLSIPVGL MFLACVIFFA GHKLYVKVKA SGSPLAGIAR VIAAAISKRG LKPVKQPWVD LYNHIPRNYA
301: NLTLKYTDQF RFLDKAAIMT PEDKLNSDGT ASDPWKLCTM QQVEEVKCII RVIPIWFACA IYYLAISIQM TYPVFQAQQS DRRLGTGGFK IPAATYVVFL
401: MTGMTVFIII YDRVLVPSLK RVTGLDTGIT LLQRIGAGIF FAVLSLLVSG FIEERRRSIA LAKQTLGMEP RTGEISSMSA MWLIPQLVLA GIAEAFTAIG
501: QMEFYYKQFP ENMRSFAGSI FYVGAGVSSY LASFLISTVH RTTEHSPSGN WLAEDLNKAK LDYFYFMLTG LMFVNMVYFL IMAKFYRYKG SDDKVISAIE
601: TSEDETKQKQ AKNSV
Best Arabidopsis Sequence Match ( AT3G47960.1 )
(BLAST)
001: MKSRVILNHR DRRDKNHNNN NTNHYTQVDT MERKPLEVEP STTTTNTDVV DSFEEEQRKI VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTSVFNLK
101: SYTAATIINA FSGTINFGTF IAAFLCDTYF GRYKTLSVAV IACFLGSFVI LLTAAIPSLH PVACGNKISC EGPSVGQILF LLMGLGFLVV GAGGIRPCNL
201: AFGADQFNPK SESGKKGINS FFNWYFFTFT FAQIISLTAV VYIQSNVSWT IGLIIPVALM FLACVIFFAG DRLYVKVKAS GSPLAGIARV IAAAIKKRGL
301: KPVKQPWVNL YNHIPSNYAN TTLKYTDQFR FLDKAAIMTP EEKLNSDGTA SDPWKLCTLQ QVEEVKCIVR VIPIWFASTI YYLAITIQMT YPVFQALQSD
401: RRLGSGGFRI PAATYVVFLM TGMTVFIIFY DRVLVPSLRR VTGLETGISL LQRIGAGFTF AIMSLLVSGF IEERRRNFAL TKPTLGMAPR TGEISSMSAL
501: WLIPQLTLAG IAEAFAAIGQ MEFYYKQFPE NMKSFAGSIF YVGAGVSSYL ASFLISTVHR TTAHSPSGNW LAEDLNKAKL DYFYFMLTGL MVVNMAYFLL
601: MARWYRYKGG NDEDITEIET NEEETKQQQL QDKNSV
Arabidopsis Description
NPF2.10GTR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6P7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.