Factsheet for Bra004030.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
vacuole 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07377	Canola	cytosol, peroxisome, plasma membrane	98.83	98.83
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	88.42	89.02
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	88.09	88.09
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	87.58	86.42
Bra038366.1-P	Field mustard	plasma membrane	66.11	84.91
KRH75378	Soybean	plasma membrane	70.97	73.44
KRH75379	Soybean	plasma membrane	56.88	70.62
Solyc05g009500.2.1	Tomato	plasma membrane	66.11	68.76
VIT_01s0011g03400.t01	Wine grape	plasma membrane	67.11	68.61
PGSC0003DMT400037693	Potato	plasma membrane	66.28	68.1
GSMUA_Achr5P24480_001	Banana	plasma membrane	63.76	65.07
EER88193	Sorghum	cytosol, golgi, peroxisome	58.05	58.15
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	57.89	58.08
Os06t0264500-01	Rice	extracellular	57.55	57.45
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	59.23	57.12
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	58.39	56.77
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	58.56	56.47
HORVU7Hr1G042120.1	Barley	cytosol	58.39	56.4
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.75	38.07
Bra025695.1-P	Field mustard	plasma membrane	36.74	37.76
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.74	37.5
Bra027185.1-P	Field mustard	plasma membrane	37.08	37.27
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.74	36.99
Bra018952.1-P	Field mustard	plasma membrane	37.25	36.63
Bra035886.1-P	Field mustard	plasma membrane	30.2	36.22
Bra016259.1-P	Field mustard	plastid	37.75	36.17
Bra020609.1-P	Field mustard	plasma membrane	32.55	33.92
Bra035885.1-P	Field mustard	peroxisome	32.05	33.87
Bra033884.1-P	Field mustard	plasma membrane	14.09	33.73
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.73	33.66
Bra010111.1-P	Field mustard	plasma membrane	34.4	33.5
Bra009996.1-P	Field mustard	peroxisome	31.88	33.39
Bra019521.1-P	Field mustard	plasma membrane	34.23	33.39
Bra016260.1-P	Field mustard	plasma membrane	30.7	33.21
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.23	33.17
Bra029248.1-P	Field mustard	plasma membrane	34.06	33.17
Bra033955.1-P	Field mustard	plasma membrane	30.37	32.97
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.96	32.85
Bra021295.1-P	Field mustard	plasma membrane	30.54	32.67
Bra033836.1-P	Field mustard	plasma membrane	27.85	31.8
Bra021168.1-P	Field mustard	plasma membrane	37.08	25.37
Bra016534.1-P	Field mustard	plastid	35.74	20.64
Bra038280.1-P	Field mustard	plasma membrane	29.03	15.49
Bra008953.1-P	Field mustard	plasma membrane	30.54	11.77

Protein Annotations

MapMan:11.6.4.1	MapMan:24.2.2.9	EnsemblPlantsGene:Bra004030	EnsemblPlants:Bra004030.1	EnsemblPlants:Bra004030.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:M4CIJ6	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00025419F2	SEG:seg

Description

AT1G68570 (E=1e-299) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA07:-:16391103..16394987

Molecular Weight (calculated)

66412.5 Da

IEP (calculated)

9.427

GRAVY (calculated)

0.259

Length

596 amino acids

Sequence
(BLAST)

001: MEEQSKNKIS EEEKQLHGKP SRRKGGLITM PFIFANEMCE KMAVVGFHSN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLVGGFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SVLYIALLLG AIGSGGIRPC VVAFGADQFD ESDPEQTTKP WNYFNWFYFI MGAAVLVAVT
201: VLVYIQDNVG WGVGLGIPTL AMFLSVIAFV GGFRLYRHLR PSGSPFTRLI QVAVAAFHKR KLSMVSDHTL LYFNDEIDAT ISLDGILTHT KHMSFLDKAA
301: IKTEEDNLKS GQIPNLWRLS TVHRVEELKS VIRMGPIGAS GILLFTAYAQ QGTFSLQQAK TMNRHLTKSF QIPAGSMSVF TTVAMLCTVV FYDRIFVKIA
401: RKFTGLERGI TFLYRMGIGF VISLIATLIA GFVEIKRKQV ALEHGLLDKP HTVIPISFMW LIPQYSLHGI AEAFMSIGSL EFFYDQAPES MRSTAMALFW
501: MSISIGNYAS TLLVTLVHTF SAKPDGSNWL PDKNLNQGRL EYFYWLITLL QAINFVYYLW CAKIYTYKPV QVHHSKKVNS PVSGELRLSK KNLVDA

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.