Factsheet for Bra012429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25813	Canola	cytosol, peroxisome, plasma membrane	98.42	98.42
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	76.58	75.52
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.84	66.16
Bra016259.1-P	Field mustard	plastid	69.37	63.34
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.8	60.76
KRH74756	Soybean	plastid	57.39	52.58
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	57.39	52.41
VIT_01s0026g01490.t01	Wine grape	plastid	56.16	51.53
KRH69380	Soybean	plastid	56.51	51.03
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	53.87	50.49
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	53.87	50.41
GSMUA_Achr4P17590_001	Banana	plasma membrane	35.39	44.97
Os01t0913300-01	Rice	plasma membrane	47.01	44.5
HORVU3Hr1G092870.1	Barley	plasma membrane	47.01	44.06
TraesCS3B01G454100.1	Wheat	plasma membrane	46.83	43.97
TraesCS3D01G414400.1	Wheat	plasma membrane	46.65	43.95
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	37.5	43.83
TraesCS3D01G414300.1	Wheat	plasma membrane	46.48	43.49
Bra016260.1-P	Field mustard	plasma membrane	42.08	43.38
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	43.31	43.23
TraesCS3B01G454000.1	Wheat	plasma membrane	46.3	43.19
TraesCS3A01G418700.1	Wheat	plasma membrane	45.95	43.0
TraesCS3A01G418800.1	Wheat	plasma membrane	47.01	42.93
Bra035886.1-P	Field mustard	plasma membrane	36.44	41.65
Bra025695.1-P	Field mustard	plasma membrane	41.37	40.52
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.55	39.86
Bra010111.1-P	Field mustard	plasma membrane	42.61	39.54
Bra029248.1-P	Field mustard	plasma membrane	42.43	39.38
Bra019521.1-P	Field mustard	plasma membrane	42.08	39.12
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.25	39.02
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.2	38.05
Bra035885.1-P	Field mustard	peroxisome	37.68	37.94
KXG37624	Sorghum	plasma membrane	40.32	37.85
Bra009996.1-P	Field mustard	peroxisome	37.68	37.61
Bra020609.1-P	Field mustard	plasma membrane	36.97	36.71
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.03	36.49
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	37.5	35.74
EES13016	Sorghum	cytosol, nucleus, plasma membrane	39.44	35.05
Bra038366.1-P	Field mustard	plasma membrane	28.52	34.91
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.8	34.6
Bra027185.1-P	Field mustard	plasma membrane	35.56	34.06
Bra021295.1-P	Field mustard	plasma membrane	32.57	33.21
Bra033955.1-P	Field mustard	plasma membrane	32.04	33.15
Os04t0660900-01	Rice	plasma membrane, plastid	36.8	33.12
Zm00001d001976_P001	Maize	plastid	38.91	32.99
Bra018952.1-P	Field mustard	plasma membrane	35.04	32.84
Bra033884.1-P	Field mustard	plasma membrane	13.38	30.52
Bra033836.1-P	Field mustard	plasma membrane	27.82	30.27
Bra021168.1-P	Field mustard	plasma membrane	36.09	23.54
Bra016534.1-P	Field mustard	plastid	40.32	22.19
Bra038280.1-P	Field mustard	plasma membrane	30.28	15.4
Bra008953.1-P	Field mustard	plasma membrane	32.75	12.03

Protein Annotations

MapMan:24.2.2.9	EnsemblPlantsGene:Bra012429	EnsemblPlants:Bra012429.1	EnsemblPlants:Bra012429.1-P	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154
GO:GO:0007275	GO:GO:0008150	GO:GO:0009605	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0009991	GO:GO:0010098	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0043562	GO:GO:0048316	GO:GO:0055085	GO:GO:0080054	UniProt:M4D7G9
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF20	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI0002540B8C	SEG:seg	:	:	:

Description

AT1G27080 (E=5e-249) NRT1.6 | NRT1.6 (NITRATE TRANSPORTER 1.6); low affinity nitrate transmembrane transporter/ transporter

Coordinates

chrA07:+:7733803..7736841

Molecular Weight (calculated)

63857.3 Da

IEP (calculated)

9.118

GRAVY (calculated)

0.265

Length

568 amino acids

Sequence
(BLAST)

001: MEVLENAKNP NNSPERKRGG WISISFILGN ETLERMGTIG LSANFMAYLT NVFHMKLVDA SNFFNLWLGL SNLAPLLGAI ISDAYAGRFK TIAYASFFSL
101: LGLMTVTLTA WLHQLHPPEC NIHRPDSCDR PNKLQLGVLF LGLSFLSIGS GGIRPCSIPF GVDQFDQRTE KGLKGMASYF NWYYLTFSIV LIVSHTVIVY
201: IQDNISWTVG FSIPTGLMAC SIVLFFVGMR FYVYVKPEGS AFSSIARVIL AARKKRNLKL PVEDDGTVEY YDPPLKPGVL SKLPLTNQYK FLDKAAVITE
301: GDLTSAGVPV NKWRLCSVQE VEEVKCLIRI IPVWSAGIIS VVTMSTQVTF IVPQAMKMDR HMGPHFEIPA GSVSVISFIT IGIWLPIYDR VLVPSLWRIR
401: KFRVTLLQRM GIGIVFGIVS MFTAAIVERV RRTQALKMTQ VSVFWLAWQL VLMGLSESFN YIGQIEFFNS QFPEHMRSLA NSLLPLSFAA SHYLTSLLVT
501: TVHKFSGGKD KPDWLDNDLN KGRLDYLYYM IAGLGVVNLV YFWYCARSYQ YKAGSQIEDL AEEKSLVD

Best Arabidopsis Sequence Match ( AT1G27080.1 )
(BLAST)

001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS

Arabidopsis Description

NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.