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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • plasma membrane 3
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83027 Canola cytosol, peroxisome, plasma membrane 97.4 99.5
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 87.48 87.48
Bra019521.1-P Field mustard plasma membrane 86.67 87.23
AT3G47960.1 Thale cress plasma membrane 81.63 78.93
Bra035886.1-P Field mustard plasma membrane 62.6 77.46
Bra010111.1-P Field mustard plasma membrane 76.91 77.29
Bra029248.1-P Field mustard plasma membrane 76.42 76.8
Bra035885.1-P Field mustard peroxisome 67.15 73.23
Bra025695.1-P Field mustard plasma membrane 57.56 61.03
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 58.7 60.98
KRH03408 Soybean cytosol, peroxisome, plasma membrane 56.59 58.78
KRH56970 Soybean cytosol, peroxisome, plasma membrane 56.59 58.29
KRH03412 Soybean plasma membrane 54.15 56.83
KRH56968 Soybean plasma membrane 54.96 56.71
Solyc03g113420.2.1 Tomato plasma membrane 53.98 56.56
PGSC0003DMT400065196 Potato plasma membrane 54.15 56.35
KRH56969 Soybean plasma membrane 55.12 55.48
KRH03409 Soybean plasma membrane 54.96 55.23
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 46.83 51.43
GSMUA_Achr4P22320_001 Banana plasma membrane 40.81 49.6
Os12t0638300-01 Rice extracellular, plasma membrane 46.99 49.23
GSMUA_Achr5P15030_001 Banana cytosol 37.07 48.1
Os03t0687000-02 Rice plasma membrane 45.69 47.87
Zm00001d013529_P002 Maize plasma membrane 45.85 47.72
TraesCS4D01G026800.1 Wheat golgi, unclear 45.85 47.32
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 45.69 47.23
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 46.02 47.09
TraesCS4A01G283900.1 Wheat golgi, unclear 45.69 47.07
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 45.04 47.03
Zm00001d031213_P001 Maize plasma membrane 38.86 46.95
EER91066 Sorghum cytosol, peroxisome, plasma membrane 45.04 46.71
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 43.74 45.75
TraesCS2A01G045500.1 Wheat plasma membrane 44.39 45.58
TraesCS2D01G044200.1 Wheat plasma membrane 44.39 45.58
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 45.37 45.44
TraesCS2B01G057700.1 Wheat plasma membrane 44.23 45.41
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 44.88 45.17
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 44.55 45.14
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 44.88 45.1
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 44.06 44.87
TraesCS2D01G044000.1 Wheat plasma membrane 43.74 44.68
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 44.88 44.66
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 44.72 44.64
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 43.9 44.63
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 42.6 44.33
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 42.6 44.11
EES16414 Sorghum cytosol, peroxisome, plasma membrane 42.6 43.89
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 42.6 42.67
EER98133 Sorghum plasma membrane 45.04 42.55
Bra016259.1-P Field mustard plastid 42.76 42.28
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 23.41 41.86
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 38.05 41.2
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 43.74 39.21
Bra016260.1-P Field mustard plasma membrane 33.98 37.93
Bra038366.1-P Field mustard plasma membrane 27.64 36.64
Bra009996.1-P Field mustard peroxisome 33.82 36.56
Bra020609.1-P Field mustard plasma membrane 33.82 36.36
Bra016534.1-P Field mustard plastid 59.35 35.37
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 33.82 35.14
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 33.66 34.27
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 33.17 34.23
Bra033836.1-P Field mustard plasma membrane 27.8 32.76
Bra027185.1-P Field mustard plasma membrane 31.54 32.72
Bra033955.1-P Field mustard plasma membrane 28.29 31.69
Bra018952.1-P Field mustard plasma membrane 30.89 31.35
Bra021295.1-P Field mustard plasma membrane 28.13 31.06
Bra033884.1-P Field mustard plasma membrane 11.87 29.32
Bra021168.1-P Field mustard plasma membrane 32.03 22.62
Bra038280.1-P Field mustard plasma membrane 26.83 14.77
Bra008953.1-P Field mustard plasma membrane 27.64 11.0
Protein Annotations
MapMan:24.2.2.9EnsemblPlantsGene:Bra033782EnsemblPlants:Bra033782.1EnsemblPlants:Bra033782.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085InterPro:IPR020846UniProt:M4EY90InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0002543D65
SEG:seg:::::
Description
AT3G47960 (E=4e-264) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA01:-:14280111..14282463
Molecular Weight (calculated)
68057.0 Da
IEP (calculated)
9.093
GRAVY (calculated)
0.228
Length
615 amino acids
Sequence
(BLAST)
001: MERKPFEVET TEDHKPYSDG GGSDLTSTVD SSGDEQKKLV YRGWKVMPYI IGNETFEKIG IIGTLSNLLV YLTQVFNLKK YTAATIISAF SGTINFGTFF
101: AAFLCDTYFG RYKTLSVAVI ACFLGSLFIL MTAAVPGLHP TPCGTKSSCQ GPNGGQVLFL LLGLALLVVG AGGIRPCNLA FGADQFNPKS ESGRKGINSF
201: FNWYFFTFTF AQIISLTLVV YIQSNVSWTI GLSIPVGLMF LACVIYFAGH NLYVKVKASG SPLAGIARVI AAAIKKRGLK PVKKPCSDLY NHIPPNYANS
301: TLKYSDQFRF LDKAAVMTPE DKLKPDGTAS DPWNLCTMQQ VEEVKCIVRV IPIWLACAVY YLAITLQMTY PVFQALQSDR RLGSGGFKIP GATYVVFLMS
401: GMTVFIIFYD RVLVPSLRRV TGLDNGITLL QRIGSGIFFA LLSLLVSGFV EERRRAIALT KPTLGIEPRA GEISSMSAMW LIPQLVLAGI AEAFAAVGQM
501: EFYYKQFPEN MKSFAGSIFY VGAGVSSYLA SFLISTVHKT TEHSRSGNWL AEDLNKGKLD YFYFMLTGLM FVNMVYFLLM AKFYRYKVTN DEANSVIKTN
601: EEETKENQQH DKSYV
Best Arabidopsis Sequence Match ( AT3G47960.1 )
(BLAST)
001: MKSRVILNHR DRRDKNHNNN NTNHYTQVDT MERKPLEVEP STTTTNTDVV DSFEEEQRKI VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTSVFNLK
101: SYTAATIINA FSGTINFGTF IAAFLCDTYF GRYKTLSVAV IACFLGSFVI LLTAAIPSLH PVACGNKISC EGPSVGQILF LLMGLGFLVV GAGGIRPCNL
201: AFGADQFNPK SESGKKGINS FFNWYFFTFT FAQIISLTAV VYIQSNVSWT IGLIIPVALM FLACVIFFAG DRLYVKVKAS GSPLAGIARV IAAAIKKRGL
301: KPVKQPWVNL YNHIPSNYAN TTLKYTDQFR FLDKAAIMTP EEKLNSDGTA SDPWKLCTLQ QVEEVKCIVR VIPIWFASTI YYLAITIQMT YPVFQALQSD
401: RRLGSGGFRI PAATYVVFLM TGMTVFIIFY DRVLVPSLRR VTGLETGISL LQRIGAGFTF AIMSLLVSGF IEERRRNFAL TKPTLGMAPR TGEISSMSAL
501: WLIPQLTLAG IAEAFAAIGQ MEFYYKQFPE NMKSFAGSIF YVGAGVSSYL ASFLISTVHR TTAHSPSGNW LAEDLNKAKL DYFYFMLTGL MVVNMAYFLL
601: MARWYRYKGG NDEDITEIET NEEETKQQQL QDKNSV
Arabidopsis Description
NPF2.10GTR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6P7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.