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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019521.1-P Field mustard plasma membrane 81.45 84.78
CDY51783 Canola cytosol, peroxisome, plasma membrane 80.35 84.74
CDY36913 Canola cytosol, peroxisome, plasma membrane 81.92 84.72
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 81.76 84.55
CDY69433 Canola golgi, peroxisome, plastid 83.81 84.07
CDY21805 Canola cytosol, peroxisome, plasma membrane 81.92 83.9
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 78.93 81.63
CDX83027 Canola cytosol, peroxisome, plasma membrane 76.89 81.23
CDX68450 Canola cytosol, peroxisome, plasma membrane 78.46 81.14
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 77.36 79.87
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 57.55 62.35
Solyc03g113420.2.1 Tomato plasma membrane 54.4 58.94
PGSC0003DMT400065196 Potato plasma membrane 53.93 58.04
KRH03408 Soybean cytosol, peroxisome, plasma membrane 53.77 57.77
KRH56968 Soybean plasma membrane 53.93 57.55
KRH03412 Soybean plasma membrane 52.99 57.51
KRH56970 Soybean cytosol, peroxisome, plasma membrane 53.46 56.95
KRH03409 Soybean plasma membrane 53.3 55.39
KRH56969 Soybean plasma membrane 53.14 55.32
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 45.13 51.25
Os12t0638300-01 Rice extracellular, plasma membrane 47.01 50.94
GSMUA_Achr4P22320_001 Banana plasma membrane 40.25 50.59
Zm00001d013529_P002 Maize plasma membrane 46.07 49.58
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 45.91 49.58
EER91066 Sorghum cytosol, peroxisome, plasma membrane 45.6 48.9
Os03t0687000-02 Rice plasma membrane 45.13 48.89
TraesCS4D01G026800.1 Wheat golgi, unclear 45.75 48.83
TraesCS4A01G283900.1 Wheat golgi, unclear 45.6 48.58
GSMUA_Achr5P15030_001 Banana cytosol 35.85 48.1
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 44.97 48.07
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 45.13 47.75
Zm00001d031213_P001 Maize plasma membrane 38.05 47.54
TraesCS2A01G045500.1 Wheat plasma membrane 44.34 47.08
TraesCS2B01G057700.1 Wheat plasma membrane 44.18 46.91
TraesCS2D01G044200.1 Wheat plasma membrane 44.03 46.74
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 42.92 46.43
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 43.4 45.7
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 43.87 45.59
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 43.4 45.47
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 43.24 45.45
TraesCS2D01G044000.1 Wheat plasma membrane 42.92 45.35
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 43.55 45.34
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 43.87 45.29
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 43.71 45.28
EES16414 Sorghum cytosol, peroxisome, plasma membrane 42.14 44.89
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 41.2 44.11
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 42.77 44.01
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 42.3 43.81
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 42.45 43.55
EER98133 Sorghum plasma membrane 44.34 43.32
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 38.36 42.36
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 43.08 39.94
AT1G69860.1 Thale cress plasma membrane 33.49 38.38
AT5G28470.2 Thale cress plasma membrane 33.02 37.43
AT1G68570.1 Thale cress cytosol, peroxisome, plasma membrane 33.02 35.23
AT3G45650.2 Thale cress plasma membrane 30.66 33.39
AT3G45660.2 Thale cress plasma membrane 29.87 32.87
AT3G16180.1 Thale cress plasma membrane 30.19 32.49
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 29.72 31.14
AT5G11570.1 Thale cress plasma membrane 23.43 30.98
AT3G45700.1 Thale cress plasma membrane 26.26 30.47
AT3G45720.1 Thale cress plasma membrane 26.57 30.45
AT3G45680.1 Thale cress plasma membrane 26.57 30.29
AT3G45710.1 Thale cress plasma membrane 25.94 29.46
AT3G45690.1 Thale cress plasma membrane 23.74 29.26
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:823951UniProt:A0A178V6P7ProteinID:AEE78351.1EMBL:AF370202
EMBL:AF428467ArrayExpress:AT3G47960EnsemblPlantsGene:AT3G47960RefSeq:AT3G47960TAIR:AT3G47960RefSeq:AT3G47960-TAIR-G
EnsemblPlants:AT3G47960.1TAIR:AT3G47960.1Unigene:At.20263ProteinID:CAB41143.1GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0009506GO:GO:0016020GO:GO:0016021GO:GO:0022857
GO:GO:0055085GO:GO:0090448GO:GO:0090449GO:GO:1901349InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfRefSeq:NP_566896.2ProteinID:OAP01434.1PFAM:PF00854PO:PO:0000005PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59UniProt:Q944G5SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0000048811SEG:seg::::
Description
NPF2.10GTR1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6P7]
Coordinates
chr3:-:17697942..17700923
Molecular Weight (calculated)
71043.5 Da
IEP (calculated)
9.278
GRAVY (calculated)
0.197
Length
636 amino acids
Sequence
(BLAST)
001: MKSRVILNHR DRRDKNHNNN NTNHYTQVDT MERKPLEVEP STTTTNTDVV DSFEEEQRKI VYRGWKVMPF IIGNETFEKL GIIGTLSNLL VYLTSVFNLK
101: SYTAATIINA FSGTINFGTF IAAFLCDTYF GRYKTLSVAV IACFLGSFVI LLTAAIPSLH PVACGNKISC EGPSVGQILF LLMGLGFLVV GAGGIRPCNL
201: AFGADQFNPK SESGKKGINS FFNWYFFTFT FAQIISLTAV VYIQSNVSWT IGLIIPVALM FLACVIFFAG DRLYVKVKAS GSPLAGIARV IAAAIKKRGL
301: KPVKQPWVNL YNHIPSNYAN TTLKYTDQFR FLDKAAIMTP EEKLNSDGTA SDPWKLCTLQ QVEEVKCIVR VIPIWFASTI YYLAITIQMT YPVFQALQSD
401: RRLGSGGFRI PAATYVVFLM TGMTVFIIFY DRVLVPSLRR VTGLETGISL LQRIGAGFTF AIMSLLVSGF IEERRRNFAL TKPTLGMAPR TGEISSMSAL
501: WLIPQLTLAG IAEAFAAIGQ MEFYYKQFPE NMKSFAGSIF YVGAGVSSYL ASFLISTVHR TTAHSPSGNW LAEDLNKAKL DYFYFMLTGL MVVNMAYFLL
601: MARWYRYKGG NDEDITEIET NEEETKQQQL QDKNSV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.