Factsheet for AT3G16180.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30141	Canola	plasma membrane	89.51	89.21
Bra033884.1-P	Field mustard	plasma membrane	37.56	89.16
CDX97728	Canola	plasma membrane	89.17	88.87
Bra027185.1-P	Field mustard	plasma membrane	89.0	88.7
CDY70561	Canola	plasma membrane	80.88	87.87
CDY20187	Canola	plasma membrane	43.32	87.07
CDY28371	Canola	plasma membrane	71.07	86.42
CDY51257	Canola	plastid	69.88	84.98
AT1G52190.1	Thale cress	cytosol, peroxisome, plasma membrane	78.17	76.11
Bra021168.1-P	Field mustard	plasma membrane	88.32	59.93
VIT_09s0002g04130.t01	Wine grape	plasma membrane	61.42	58.36
KRH44330	Soybean	plasma membrane	54.82	55.2
PGSC0003DMT400006545	Potato	plasma membrane	43.32	54.82
KRH47260	Soybean	plasma membrane	54.48	53.14
KRH47259	Soybean	plasma membrane	54.82	53.03
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	53.47	52.58
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	53.81	52.39
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	54.48	52.27
Solyc03g120560.2.1	Tomato	plasma membrane	52.45	51.41
PGSC0003DMT400068025	Potato	plasma membrane	51.61	50.92
Solyc12g044310.1.1	Tomato	plasma membrane	53.47	50.24
Solyc03g120550.2.1	Tomato	plasma membrane	53.81	49.69
AT5G11570.1	Thale cress	plasma membrane	36.72	45.11
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	37.23	36.91
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	34.86	35.76
AT5G28470.2	Thale cress	plasma membrane	32.83	34.58
AT1G18880.1	Thale cress	cytosol, peroxisome, plasma membrane	34.01	34.24
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	34.86	33.23
AT1G69860.1	Thale cress	plasma membrane	29.95	31.89
AT5G62680.1	Thale cress	golgi, peroxisome, vacuole	33.16	31.82
AT3G45680.1	Thale cress	plasma membrane	29.61	31.36
AT3G45720.1	Thale cress	plasma membrane	29.44	31.35
AT3G47960.1	Thale cress	plasma membrane	32.49	30.19
AT3G45650.2	Thale cress	plasma membrane	29.78	30.14
AT3G45660.2	Thale cress	plasma membrane	29.44	30.1
AT3G45710.1	Thale cress	plasma membrane	28.43	30.0
AT3G45700.1	Thale cress	plasma membrane	27.75	29.93
AT3G45690.1	Thale cress	plasma membrane	25.55	29.26

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	EntrezGene:820864	UniProt:A0A178VM86	ProteinID:AEE75781.1	ArrayExpress:AT3G16180
EnsemblPlantsGene:AT3G16180	RefSeq:AT3G16180	TAIR:AT3G16180	RefSeq:AT3G16180-TAIR-G	EnsemblPlants:AT3G16180.1	TAIR:AT3G16180.1
EMBL:AY099590	Unigene:At.26494	ProteinID:BAB02684.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0015706	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0080054	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	RefSeq:NP_188239.1	ProteinID:OAP06868.1	PFAM:PF00854	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0005417	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PO:PO:0025413
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157	UniProt:Q8LPL2	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI00001633F4	:	:	:	:	:

Description

NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]

Coordinates

chr3:-:5481325..5485187

Molecular Weight (calculated)

65336.7 Da

IEP (calculated)

9.308

GRAVY (calculated)

0.248

Length

591 amino acids

Sequence
(BLAST)

001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.